Gene Snas_0178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0178 
Symbol 
ID8881356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp180103 
End bp180768 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content68% 
IMG OID 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_003508991 
Protein GI291297713 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGTGA CCACGACGTC GGTGTTGCTC GTCGATGACG ATCCCATGGT GCGCAACGGG 
TTGCGCATGG TTTTGCGTGC CGATCCCGGC ATCGTGGTGG TGGGTGAGGC CGGGAACGGG
CGGCAGGCGG TCGATCAGGC TCGGGAACTG CGGCCGGACG TCGTGTTGAT GGATCTGCAG
ATGCCGGTGA TGGACGGGGT GGCGGCCACT CGTGAACTGC GCGGGTTGCC GGACGCACCG
GCTGTGTTGG TTCTGACGAC GTTTCACCTG GACACGTACA TCCTCGACGC GTTGGGCGCG
GGGGCCAGCG GGTATCTGCT CAAGGACATT CCGCCGACGG AGATCGCCCG CGCCGTGCAG
ATGGCCGCCG CCGGGGAGTC CGTCTTCTCG TCCTCGGTCA CCCGGAGTCT GGTGCAGCGG
GTCGCCAGCC CGGCCACCGA TCCGAAGATC GAGGCAGCGC GTGCCGCACT GGCGGCGCTC
ACCGAACGGG AGCGCGAGGT CGCCGCCGCC GTGGCTGCCG GGAAGTCCAA CGCCGCCATC
GCCTCCGAGA TGTTCATGAG CGAGGCCACG GTGAAGACCC ACGTGTCGCG GATCCTGACC
AAGACCCGCA GCCAGAACCG GGTGCAGATC GCGCTCACCG TCTACCGGGC GTCCGGCGTC
CGCTGA
 
Protein sequence
MDVTTTSVLL VDDDPMVRNG LRMVLRADPG IVVVGEAGNG RQAVDQAREL RPDVVLMDLQ 
MPVMDGVAAT RELRGLPDAP AVLVLTTFHL DTYILDALGA GASGYLLKDI PPTEIARAVQ
MAAAGESVFS SSVTRSLVQR VASPATDPKI EAARAALAAL TEREREVAAA VAAGKSNAAI
ASEMFMSEAT VKTHVSRILT KTRSQNRVQI ALTVYRASGV R