Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_0178 |
Symbol | |
ID | 8881356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 180103 |
End bp | 180768 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | two component transcriptional regulator, LuxR family |
Protein accession | YP_003508991 |
Protein GI | 291297713 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGACGTGA CCACGACGTC GGTGTTGCTC GTCGATGACG ATCCCATGGT GCGCAACGGG TTGCGCATGG TTTTGCGTGC CGATCCCGGC ATCGTGGTGG TGGGTGAGGC CGGGAACGGG CGGCAGGCGG TCGATCAGGC TCGGGAACTG CGGCCGGACG TCGTGTTGAT GGATCTGCAG ATGCCGGTGA TGGACGGGGT GGCGGCCACT CGTGAACTGC GCGGGTTGCC GGACGCACCG GCTGTGTTGG TTCTGACGAC GTTTCACCTG GACACGTACA TCCTCGACGC GTTGGGCGCG GGGGCCAGCG GGTATCTGCT CAAGGACATT CCGCCGACGG AGATCGCCCG CGCCGTGCAG ATGGCCGCCG CCGGGGAGTC CGTCTTCTCG TCCTCGGTCA CCCGGAGTCT GGTGCAGCGG GTCGCCAGCC CGGCCACCGA TCCGAAGATC GAGGCAGCGC GTGCCGCACT GGCGGCGCTC ACCGAACGGG AGCGCGAGGT CGCCGCCGCC GTGGCTGCCG GGAAGTCCAA CGCCGCCATC GCCTCCGAGA TGTTCATGAG CGAGGCCACG GTGAAGACCC ACGTGTCGCG GATCCTGACC AAGACCCGCA GCCAGAACCG GGTGCAGATC GCGCTCACCG TCTACCGGGC GTCCGGCGTC CGCTGA
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Protein sequence | MDVTTTSVLL VDDDPMVRNG LRMVLRADPG IVVVGEAGNG RQAVDQAREL RPDVVLMDLQ MPVMDGVAAT RELRGLPDAP AVLVLTTFHL DTYILDALGA GASGYLLKDI PPTEIARAVQ MAAAGESVFS SSVTRSLVQR VASPATDPKI EAARAALAAL TEREREVAAA VAAGKSNAAI ASEMFMSEAT VKTHVSRILT KTRSQNRVQI ALTVYRASGV R
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