Gene Snas_0126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0126 
Symbol 
ID8881303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp134180 
End bp135238 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003508940 
Protein GI291297662 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0192432 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAAGA CATGGGCACG CAGGACGGTC CAGGCGAGCG CGATCGCCGC CGGAGTCCTG 
CTCGTGTCGG CGGGGGCCGC GCAGGCTTAC GGTTCCGACG CCAACACCAC TGGAAACATC
GGTGTCGGCA CCGGCAATCA GGCCATGGCC CCGGTGCAGG CGCCCATCGA CATCTGCGGG
AACGCCACCT CGGTGCTGGG CGTCGCGAAC GCCGGTTGCC ACGGCGGCTC CAACGCCACC
ATGACCGAGT CGGCTCACGG CGGGTCGGAC CTGACCAGCA CCGGCAACAT GGGCGTCGGC
AACGGCAACC AGGTGTACGC GCCGATCCAG GCGCCGATCA GCGTCTGTGG CAACTCGACC
TCGGTCGCCG GCTCGGCCAC CTCCGGCTGC AAGGGCGGCT CCGACGCCAC CCTGAACAAC
GGTCACGGTG CGCCCGACGC CACCACCACC GGCAACCTCG GCGCCCTGAC GGGCAACCAG
GCGATCCTGC CGGTGCAGGC GCCCGTCGAC GTCAGCGGCA ACGCCACCAC CGTCGGCGGC
CACTCCGTGG CCGGTAGCCA CGGCGGCTCC AACGCGCTGG CCTGGGCCGG TGGCCACCAC
AAGGCCGCCG AGGCGCTCCC CGGCGTTCCC GGCGGACTGC CCACCGCGGG CGTCACCAAC
GTGCCCGTGG GCCAGGTGAC CGGAGCGCTG CCGACGAACG ACCTCGGCAA CAAACTGACC
TCCGGCGGCG TCGACGGCGT GACCGGCAAC CTGCCGACCG CGGGCGTGAC CGACGGCCTG
CCCACCGCGG GCGTGACCGA CGGCATCACC GGCAAGAAGC CGGTTAAGGA CGTCACCAAG
AAGGCCACCA AGGTCACCAA GCCCGCCACC GAGTCGGGCC GGGTCGCCGA GCACGGTGGG
GCCGACCTGA CCAGCACCGG AAACCTCGGT GTCGGCAACG GCAACCAGGT GTACGCGCCC
ATCCAGATCC CGGTCGACAT CAGCGGCAAC TCGATCGCCG TGGGCGGCGT CAGCACCGCG
GGCAGCCACG GCGGCTCCAA CGCCACGCAG AACCACTGA
 
Protein sequence
MTKTWARRTV QASAIAAGVL LVSAGAAQAY GSDANTTGNI GVGTGNQAMA PVQAPIDICG 
NATSVLGVAN AGCHGGSNAT MTESAHGGSD LTSTGNMGVG NGNQVYAPIQ APISVCGNST
SVAGSATSGC KGGSDATLNN GHGAPDATTT GNLGALTGNQ AILPVQAPVD VSGNATTVGG
HSVAGSHGGS NALAWAGGHH KAAEALPGVP GGLPTAGVTN VPVGQVTGAL PTNDLGNKLT
SGGVDGVTGN LPTAGVTDGL PTAGVTDGIT GKKPVKDVTK KATKVTKPAT ESGRVAEHGG
ADLTSTGNLG VGNGNQVYAP IQIPVDISGN SIAVGGVSTA GSHGGSNATQ NH