Gene Smon_0178 details

Gene Information

• Locus tag: Smon_0178
• ID: 8599876
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Streptobacillus moniliformis DSM 12112
• Kingdom: Bacteria
• Replicon accession: NC_013515
• Strand: +
• Start bp: 209995
• End bp: 212070
• Gene Length: 2076 bp
• Protein Length: 691 aa
• Translation table: 11
• GC content: 31%
• Product: YadA domain protein
• Protein accession: YP_003305542
• Protein GI: 269122965

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAA ATAATTTGTT TAAAATATTA TCCTTTATCT CTATAATGTC ATATATAAGT 
ATAGGTAATG AAAAAGGATC AAATATTATT GGAAATAAGA GGGCAGCTTC TGTATTAACA 
AATACAGCAA CAGGAGAAAG AGCTATAGCT TTAGGAGAAG ATGCTAAAGC TTCAGCAAAT 
AGAGCAATAG CTATAGGAGA AGATTCAGAA TCAAGTGGAC AAACTTCCAT AGCAATTGGA 
GCATATTCTA AAGCAAATTC ACAAGCTGCT GTTGCTATTG GAGAAGGAGC TAAGGCTAGT 
AGTGATTCTT CTGTAGCAAT AGGCTCACTA TCTAAGGCTT TAGAAAATTC ATCAATATCT 
ATAGGAAAAA ATAGTGAAGT AAAAAAAGAA AACTCTATAG CAATAGGAAA AGAAATCTCT 
GTAGAAGGTG AAAATGCTAT TGCAATAGGT TTAGAATCAT GGATTCAAAG TAAAGATGGA 
ATTGCAATTG GAAAAAAAGC TAAATCAGCA GGTGAAGGTG CAGTTGCATT AGGTAGTGAA 
GCTGAAGCTA CAATGAGAAA TGCTATAGCG TTAGGGAATG GAGCAGTTGC TCTTGGAGAG 
AATACAGTAT CATTAGGTGG AGATGCTATG GCAACAAGTA AAAATACAAT TGCTATAGGA 
ATTAATTCAA AGGCAGAAAA AGAAAGTTCA ATAGCACTTG GAAGTGGAGC TAGATCTTCT 
AAAAAATATG GTATATCACT AGGAGAAAAT TCAAAATCAA CAGGAAATTC TGCAATATCT 
ATAGGACAGA AGAGTATTTC TAAAAACTCT AATTCAATAG CTATAGGAAC ATCTGCTACT 
TCAAATATAG AAAATTCTGT AGCATTAGGA GCAGAAAGTG AAACAACAGT AGCTAAACCT 
ACAAGTGAAA TAGTTAAACC TAGATTTTTC TTAGATTATA AAGATTTTGC AGGAAGTAAT 
CCTTATGGTG TAGTATCTAT AGGATCTAAA GGAAAAGAAA GACAATTACA ATATGTAGCA 
GCAGGTCAAA TAAGTAAGGA ATCAACAGAT GCAGTAAATG GTTCACAACT ATTTTCAGTA 
ATTTCAAACT TTGATGCTTT TGTAGCGTCT ATGAAATCTG TTATAGGAAA TGTTGCTTTT 
CTTAATAGAG ATGGTATTCT TCATACATTA AATATAGGTA ATACTGGAAA AAACAACATA 
CATGAAGCAA TGAAAAGCCT AAAAGATAAG ATAGATGAGA ATAGAAACAG AATAGAAAAG 
ATAGAAAATA CTGAAATAAA ATTAGGAGGA GATAAAAATA CAAGTACAGA AGGACAAAAG 
ATAGGAGAAA ATAATTCAAA TAATGGATCT AACATAGGGA ATCAGAATCA AAACAAAGGA 
AAAGAAATTA AATTTGAAAT AGTAAAAAAA GAAAATAGTG AACATATAGA AACAAAAGCA 
AGAGGAAATA AGGTAGAAAT AGATTTAACA CAAAAAGCAA AAGAAGATAT TAAATCAGGA 
AAAGAAGCAA AAGAAATAAT AGATAATAAA GGCTTAACAT TTAAAGGAGA TAAAGGAGAA 
ACAAATATTC AAAAACTAGG AGATACACTA TCTATAACAG GAGGAAGCTA TATAACAACA 
AAGGCAAAAG GAAATGAAGT TAGTGTAGAT CTAACAGATA AGACTAAAAA AGATATAGAA 
AAGGGAGTAT CAGCAAATAG TGGAGTAGCA AATGCTGTAG CAATGGCAAA CTTACCACAA 
ATAAATGGAA AAGGACATAA TATAGCAGGA TCATATGGTT ACTATAACGG AGAACATGCA 
TTTGCATTAG GACTATCAGG AACAAATGAG AAAGTAAATC TAACATATAG AGCAAGTGGA 
TCATTAAATA CAAGAGGTAA CATATCATTA GGAGCAGGAT TAGGTTATCA ATTTGATAAT 
ATAAGCAAAA GAAATAAAGA ACTACTAACA CTACAAAGAA ATGGAAACAT TAACTTGCTT 
GATGAGAAAG TATATGAATT AGATAATAAG GTTAAAACTT TAGAAAAGAG AGTTAATGAA 
CTAGAAACTC TTTTAAGAGA AATAATTAGA AAATAA 

 

Protein sequence

MKKNNLFKIL SFISIMSYIS IGNEKGSNII GNKRAASVLT NTATGERAIA LGEDAKASAN 
RAIAIGEDSE SSGQTSIAIG AYSKANSQAA VAIGEGAKAS SDSSVAIGSL SKALENSSIS 
IGKNSEVKKE NSIAIGKEIS VEGENAIAIG LESWIQSKDG IAIGKKAKSA GEGAVALGSE 
AEATMRNAIA LGNGAVALGE NTVSLGGDAM ATSKNTIAIG INSKAEKESS IALGSGARSS 
KKYGISLGEN SKSTGNSAIS IGQKSISKNS NSIAIGTSAT SNIENSVALG AESETTVAKP 
TSEIVKPRFF LDYKDFAGSN PYGVVSIGSK GKERQLQYVA AGQISKESTD AVNGSQLFSV 
ISNFDAFVAS MKSVIGNVAF LNRDGILHTL NIGNTGKNNI HEAMKSLKDK IDENRNRIEK 
IENTEIKLGG DKNTSTEGQK IGENNSNNGS NIGNQNQNKG KEIKFEIVKK ENSEHIETKA 
RGNKVEIDLT QKAKEDIKSG KEAKEIIDNK GLTFKGDKGE TNIQKLGDTL SITGGSYITT 
KAKGNEVSVD LTDKTKKDIE KGVSANSGVA NAVAMANLPQ INGKGHNIAG SYGYYNGEHA 
FALGLSGTNE KVNLTYRASG SLNTRGNISL GAGLGYQFDN ISKRNKELLT LQRNGNINLL 
DEKVYELDNK VKTLEKRVNE LETLLREIIR K