| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_6422 |
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| Symbol | |
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| ID | 5320725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009622 |
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| Strand | - |
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| Start bp | 79636 |
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| End bp | 81045 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640778002 |
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| Product | integrase catalytic region |
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| Protein accession | YP_001314934 |
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| Protein GI | 150378340 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.902721 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGATTGA TTGCGATGAG CGAGCGTGAT CTGCAGCGGA TTGAGGTTTT GTCGAAGGTC
ATCGATGGTC GGATGACGCT GGTAAAGGCC GCTCATGTTC TGGGGTTAAG CACGCGCCAG
GTGCGTCGAC TGCTGGAGCG GATCCGGACG GATGGTGCCG CATCGATCCG GCACAAGGCG
ATCGGTCGGC CATCGAACAA CCGGATCAGC GACGGCGTTC GGGATTATGC AGTGACGCTG
GTTCGCGAAC GCTATGCCGA CTTTGGTCCG ACGCTAGCGG CAGAGAAGCT TGCCGAGCGC
GATGGCTTGC GGGTGTCGCG CGAGACCTTG CGCAAATGGA TGGCGGAGGC CGGACTTTGG
CTGTCGCGCA AGCAGCAGCG CACCTTCCAC CAGCCACGAT TGCGACGCGA GGCCTATGGC
GAGCTGGTGC AGATCGATGG ATCGGAGCAC CGCTGGTTCG AGGATCGCGG TGATCCATGC
TCGCTGCTGG TGTTCATCGA TGATGCGACC GGCAAGCTGA TGCAGTTGCG TTTCGTGCGC
TCGGAAAGTG CGTTCAGCTA TTTCGAGGCG CTGGAGCTTT ATCTCAAAAA TCATGGTGCT
CCGGTCGCCT TCTATTCCGA CAAGCATTCC GTGTTCCGGG TGGCGAAGAA AGACGCCAAG
GGCGGCCAGG GCATGACCCA GTTCGGGCGT GCGCTTTCAG AGCTAAACAT TGAGATTCTT
TGTGCAAATT CGAGCCAGGC GAAGGGTCGG GTCGAGCGGA TGAACCGGAC GCTGCAGGAC
CGTTTGATTA AGGACCTGCG CCTGGAGGGC ATCTGTGGCA TGGACGACGG CAACGCCTTC
CTGCCTCGGT TCATGGAGGG CTATAACCGG CAGTTTGCCA TTACCCCTGC CCGACCTGAT
GATCTGCACC GGTCGCTGAA TCTTGCCCCG GATCGGCTCA AGGAGATCCT GTGCAAACGC
GAGCAGCGCT ACGTCGGTGC GCAGCTGACG TTTTCGTTCG AGCGCCAGCG GATCATGCTT
GAGGAGACCG AGGTGACGCG CGGGCTGGTC GGTCGCTATG TCGAGACCTA CGCCTATGCC
GACGGCCGGC TCGATGTGCG GTGGAAAGGC CATTGCCTGC CCTACCGGGT ATTCGACAAG
GACCAGCGGG TGACGCATGC GGCGATCACC GAGAACAAGC GGCTCGGTGA TGTCCTGGCC
TACATCAAGG CGCGCCAGGA CGAGCGGCCG GCGCCGAAGG TGAAGACCAA CAGCGAGAAG
ATCGGCTACC GACCGCGTGG CCGCAAGCCG GGCAAGCGGA CGGATTTCAC CAACGATCCA
GCGGTCGTTG CTCGGCGGCG GCAGGCGCTT TCCCAGCAAA GTGCGGTGGA GCAAGGGCAA
CCCTACCCGG CACAGTTCAA TGGAGAATAA
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| Protein sequence | MGLIAMSERD LQRIEVLSKV IDGRMTLVKA AHVLGLSTRQ VRRLLERIRT DGAASIRHKA
IGRPSNNRIS DGVRDYAVTL VRERYADFGP TLAAEKLAER DGLRVSRETL RKWMAEAGLW
LSRKQQRTFH QPRLRREAYG ELVQIDGSEH RWFEDRGDPC SLLVFIDDAT GKLMQLRFVR
SESAFSYFEA LELYLKNHGA PVAFYSDKHS VFRVAKKDAK GGQGMTQFGR ALSELNIEIL
CANSSQAKGR VERMNRTLQD RLIKDLRLEG ICGMDDGNAF LPRFMEGYNR QFAITPARPD
DLHRSLNLAP DRLKEILCKR EQRYVGAQLT FSFERQRIML EETEVTRGLV GRYVETYAYA
DGRLDVRWKG HCLPYRVFDK DQRVTHAAIT ENKRLGDVLA YIKARQDERP APKVKTNSEK
IGYRPRGRKP GKRTDFTNDP AVVARRRQAL SQQSAVEQGQ PYPAQFNGE
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