| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_6335 |
|---|
| Symbol | |
|---|
| ID | 5320638 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009622 |
|---|
| Strand | + |
|---|
| Start bp | 4381 |
|---|
| End bp | 5304 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640777931 |
|---|
| Product | homocysteine S-methyltransferase |
|---|
| Protein accession | YP_001314863 |
|---|
| Protein GI | 150378269 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2040] Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.228765 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTATAC TTGATCGCCT GTTTTCGTCG CCAGACCCAT TCATCAGCGA CGGGGGCATG
GAGACAGACC TGATCTTCCA TGAAGGCGCC GAAATGCCGC TGTTCGCTTC CTTCGTCCTG
CTCGACAGCC CGGAGGGATG CGAGATGCTG CGGCGCTACG CGGTTTCGTA TTTTGACTTG
GCCCAGGTCG CGAGTCGGGG CTTTGTGATG GGCACGCCGA CCTGGCGCGC CAATGGTGGC
TGGGGGCCGA AGCTTGGGCT CGACGACGCA GGGATCCGGG ACGTCAACCG GCGCGCCATC
GCCTTCGCCC GCGACCTGCG GAGCGCCCAT CCTTGGCGTG ACCATATCCT GATCGAGGGG
GTGCTCGGGC CGGCAGGCGA TGGCTATGCA CCCGAGCAGC TTCTGACCCC GACCGAAGCG
GCCCGCCTGC ACAGCGCCCA GCTGGAGACC TTTGCCGAAG AAGATGTGGA CATCGCGTCG
GCCTTCACCA TCACCCATCC AGGCGAGGCC ATCGGCATGG TCAACCGGGC GCGCGATCTT
GGCCTGCCTT TCGCACTCTC ATTCACGGTG GAGACCGACG GGCGGTTGCC GACCGGGCAG
GACCTCGATT GCGCGCTCGA CGAGGTCGAA GCCGCGACTG GCGGCTACGT TCGCTATTAC
GGAATTAACT GCGCCCATCC CGAGCATTTC GGCGAACAGC TGCCATCGCG CTGGCTCAAC
CGGATTGGCG TGGTACGGCC AAACGCCTCG CGCCGCAGCC ATGCCGAACT GGACGAAGCC
ACCGAGCTCG ATGACGGTGA CCCGCAGGAG TTCGGCGCGC TTTACGCTGA AATGGCAGAG
AAGCTCCCCC GACTGCGCGT CGTCGGCGGA TGTTGCGGCT CCGACATGCG GCACATCAAG
GCTCTGATCG CGGCAGGCGT CTGA
|
|---|
| Protein sequence | MGILDRLFSS PDPFISDGGM ETDLIFHEGA EMPLFASFVL LDSPEGCEML RRYAVSYFDL
AQVASRGFVM GTPTWRANGG WGPKLGLDDA GIRDVNRRAI AFARDLRSAH PWRDHILIEG
VLGPAGDGYA PEQLLTPTEA ARLHSAQLET FAEEDVDIAS AFTITHPGEA IGMVNRARDL
GLPFALSFTV ETDGRLPTGQ DLDCALDEVE AATGGYVRYY GINCAHPEHF GEQLPSRWLN
RIGVVRPNAS RRSHAELDEA TELDDGDPQE FGALYAEMAE KLPRLRVVGG CCGSDMRHIK
ALIAAGV
|
|---|
| |