| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_6313 |
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| Symbol | |
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| ID | 5320615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 1227529 |
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| End bp | 1228644 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640777911 |
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| Product | ABC transporter, periplasmic solute-binding protein |
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| Protein accession | YP_001314843 |
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| Protein GI | 150378248 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.166388 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCATG AAAAGTTCCT GTCCGCGCAG ATCGGCCGCC GGACACTGCT TGCGTCCATG
GCCGCGGCCG GCGCTTCGGC GGGTCTTTCG ACCCTCGGCG TCAGCCGCGC CTTTGCCCAG
GAGCCGGAAA AGCCGGCCGA GATCATCATT CGCGCCTGGG GCGGCAGCTG GGTCGATGCG
CTCAAGGCCG GCGTATCCGA CAGCTTCACC AAGAACACCG GCATTGCCGT CCGTCATGAC
CTGACCGAAG ACAATGAGAT CCAGCCGAAG GTCTGGGCCG CCGTTGCCCA GAAGCGCGTC
CCGCCGATCC ACATCAACTG GGATACGACG ACGAACGCCA CCAAGTCCGC TTTGCGCGGC
GTGACCGAAG ACCTGTCCGA CCTGCCGAAC CTCAAGAACG CCACCGATCT CGCAAAGCCG
GTCGGCCTCG ACGGCTATCC GATCGTCAAC ACCTACGGTT ATGTCTACGT GCTCGCCTAT
CGCCCGTCGG CCTTTCCGAA CGGCGCGCCA AAATCCTGGA AGGATCTGCT CGACCCCAAG
CTCAAGGGCC GGATCGCGCT GTATAACGAC GGGATCGGCT TCCACTTCCC CGCGCAGGTC
GCCGGCGGCG GCAAGCTCGA GGACATTCCG GGCAACATGC AGCCGGCCTG GGATTTCATC
TCGAAGATCA AGGACCAGCA GCCGTTGCTC GGCGAGGACC CGGATTTTAC CACCTGGTTC
CAGAAGGGCG AGATCGACGC CGCCTGCACC ATCTCGACCA ATGCGAGGGA AGCCAAGAAG
AACGGCATCG AAATCGCCTG GGTCGTGCCA GAGGAAGGCG CCAAGTTCGA CACGGACGGC
CTTTGGATAC CGAAGGGTTT GCCCGAGAAC GAGCTTTACT GGGCCAAGCA ATATATCAAC
CACGCCCTGA CCAAGGAAGC GCAGCAGATC TGGCTGGACG GTCTCGGCTT GCCCGGCGTC
ATCCCCGGCA TCACGCCGCC GGCCGATCTC GTGGGCGATC CCTCCTACCC GACAACGGAG
GAGGATTTCA AGCAGCTGAT CCGTATCTCG TCCAAGGTAC AGGTCGAGAA CGAGAGCCAG
TGGTTCGCCA AGTTCAAGGA AATCATGCAG GGCTGA
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| Protein sequence | MSHEKFLSAQ IGRRTLLASM AAAGASAGLS TLGVSRAFAQ EPEKPAEIII RAWGGSWVDA
LKAGVSDSFT KNTGIAVRHD LTEDNEIQPK VWAAVAQKRV PPIHINWDTT TNATKSALRG
VTEDLSDLPN LKNATDLAKP VGLDGYPIVN TYGYVYVLAY RPSAFPNGAP KSWKDLLDPK
LKGRIALYND GIGFHFPAQV AGGGKLEDIP GNMQPAWDFI SKIKDQQPLL GEDPDFTTWF
QKGEIDAACT ISTNAREAKK NGIEIAWVVP EEGAKFDTDG LWIPKGLPEN ELYWAKQYIN
HALTKEAQQI WLDGLGLPGV IPGITPPADL VGDPSYPTTE EDFKQLIRIS SKVQVENESQ
WFAKFKEIMQ G
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