| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_6311 |
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| Symbol | |
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| ID | 5320613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 1225722 |
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| End bp | 1226522 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640777909 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001314841 |
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| Protein GI | 150378246 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.103333 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGGCA GCAAAAGCAA ATCCTTCGTC CTGTGGGCTT TCGTCACGAC TGCACTTTTG
ATGCTGTCCG CGCCCACGGT CGTGGTGCTC GGAGCCTCCT TCACCGCCGG CAACATCATC
ACCTTCCCGC CGGACGGCCT GTCGCTGAAA TGGTATGGGG CGATCGCCCA GGCAAGTGAC
CTCAGGCAAG CTTTTGTTCG TTCGCTGATC GTTGCCACGA TATGCACCCT GGTCTCGATC
CCGGTCGGCA CGCTCGCAGG CATCGCATTG GCCAAGTATC GGGTGCGGTT TGCCCGTTCG
ATCCAGATCT ATCTCTTGTT GCCGTTCACC ATTCCGCTGA TCGGTTCCGG CATCGGCATG
ATGCTGGTAC TCGGCAATAT GGGCGTTCTG GGAAAATTGT GGCCGGTCGG GATCGCCTGC
GCCGTCATCA ACCTGCCCTT CATGATCTGG GCTGTGACGG CGAGTGCCAG CAACCTGTCG
CCCGATCTGG AGCTGGCGGC GGCCAATTGC GGAGCCCCCC CGCTGCAACG CTTCCTCTAC
ATCACGCTGC CGGCCGTCCT GCCGGGCGTG ATCACGGGAT CGCTGCTGAT GTTCATTCTG
GCGCTCAACG AGTTTCTGGT CAGCCTGCTG CTGGTCGACG CCCGAAGCGT GACGCTGCCG
GTCCAGATCT ACAATTCCAT CCGCTCGATC ATCACGCCGG ACTTGGCCGC AATCTCGGTG
GTGTTCATCG CCTGCGCCGG TCTTGCGATC GCGCTGCTCG ACCGCCTGGT CGGTCTGGAT
ATTTTCCTGA AATCGAAATG A
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| Protein sequence | MTGSKSKSFV LWAFVTTALL MLSAPTVVVL GASFTAGNII TFPPDGLSLK WYGAIAQASD
LRQAFVRSLI VATICTLVSI PVGTLAGIAL AKYRVRFARS IQIYLLLPFT IPLIGSGIGM
MLVLGNMGVL GKLWPVGIAC AVINLPFMIW AVTASASNLS PDLELAAANC GAPPLQRFLY
ITLPAVLPGV ITGSLLMFIL ALNEFLVSLL LVDARSVTLP VQIYNSIRSI ITPDLAAISV
VFIACAGLAI ALLDRLVGLD IFLKSK
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