Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_6275 |
Symbol | |
ID | 5320577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | - |
Start bp | 1194427 |
End bp | 1194870 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640777874 |
Product | pseudoazurin |
Protein accession | YP_001314806 |
Protein GI | 150378211 |
COG category | [C] Energy production and conversion |
COG ID | [COG3794] Plastocyanin |
TIGRFAM ID | [TIGR02375] pseudoazurin |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.246646 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGCATAA TCGCAAAGAG CATGGCAGTC GCCGCAGTTC TTGCCGCCTT CACCGGTACA GCATTCGCCG CCGATTTCGA GGTCCGCATG CTAAACAAGG GCGCCGAGGG AGCGATGGTC TTCGAGCCGG CATTCGTCAA AGTCAACCCC GGCGACAGCG TCACGTTTGT TCCGACTGAC AAGGGACATA ACGTCGAGAC GATAAAGGAC ATGATACCCG ACGGGGCCTC GGCCTTCAAA AGCAAGATGA ACGAGACCTA CAAGGTGAGT TTCGACGTGC CAGGAGTCTA CGGCGTGAAA TGCACGCCGC ACGTCGGCAT GGGCATGGTC GGAGCAGTCG TGGTCGGTGA TGCGCCCGCC AATGTCGAAA AGGTAAAGGC AGTGAAGCTG CCCAAGAAGG CACGGGAGCG CCTCGACGCG GCACTCGCGG TGGCCCTCCA ATAG
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Protein sequence | MRIIAKSMAV AAVLAAFTGT AFAADFEVRM LNKGAEGAMV FEPAFVKVNP GDSVTFVPTD KGHNVETIKD MIPDGASAFK SKMNETYKVS FDVPGVYGVK CTPHVGMGMV GAVVVGDAPA NVEKVKAVKL PKKARERLDA ALAVALQ
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