Gene Smed_6275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_6275 
Symbol 
ID5320577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp1194427 
End bp1194870 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content60% 
IMG OID640777874 
Productpseudoazurin 
Protein accessionYP_001314806 
Protein GI150378211 
COG category[C] Energy production and conversion 
COG ID[COG3794] Plastocyanin 
TIGRFAM ID[TIGR02375] pseudoazurin 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.246646 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCATAA TCGCAAAGAG CATGGCAGTC GCCGCAGTTC TTGCCGCCTT CACCGGTACA 
GCATTCGCCG CCGATTTCGA GGTCCGCATG CTAAACAAGG GCGCCGAGGG AGCGATGGTC
TTCGAGCCGG CATTCGTCAA AGTCAACCCC GGCGACAGCG TCACGTTTGT TCCGACTGAC
AAGGGACATA ACGTCGAGAC GATAAAGGAC ATGATACCCG ACGGGGCCTC GGCCTTCAAA
AGCAAGATGA ACGAGACCTA CAAGGTGAGT TTCGACGTGC CAGGAGTCTA CGGCGTGAAA
TGCACGCCGC ACGTCGGCAT GGGCATGGTC GGAGCAGTCG TGGTCGGTGA TGCGCCCGCC
AATGTCGAAA AGGTAAAGGC AGTGAAGCTG CCCAAGAAGG CACGGGAGCG CCTCGACGCG
GCACTCGCGG TGGCCCTCCA ATAG
 
Protein sequence
MRIIAKSMAV AAVLAAFTGT AFAADFEVRM LNKGAEGAMV FEPAFVKVNP GDSVTFVPTD 
KGHNVETIKD MIPDGASAFK SKMNETYKVS FDVPGVYGVK CTPHVGMGMV GAVVVGDAPA
NVEKVKAVKL PKKARERLDA ALAVALQ