| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_6252 |
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| Symbol | |
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| ID | 5320554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 1172452 |
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| End bp | 1173492 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640777852 |
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| Product | luciferase family protein |
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| Protein accession | YP_001314784 |
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| Protein GI | 150378189 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.905079 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.361259 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTCT CACTCTTCGT TCACATGGAG CGCCTGGATG CTTCGCAAGA CCACAGGACG
CTTTACGAAG AATTCATCAA GCTGTGCGAA GTCGCCGACA AAGGCGGCAT GCACGCGATC
TGGACCGGTG AACATCATGG AATGGAGTTC ACCATTGCGC CGAATCCCTT CATAACGATT
GCCGACCTTG CCCGCCGCAC TAAGACCGTG CGGCTTGGAA CCGGCACGGT GATCGCGCCC
TTCTGGCATC CGATCAAGCT CGCGGGAGAA GCCGCAATGA CGGATCTGAT CTGCGAGGGT
CGCCTCGACA TCGGAATTGC CCGCGGCGCC TATTCCTTCG AGTACGAGCG GCTGCTGCCG
GGCCTCGACG CCTGGAGCGC TGGGCAGCGC ATGCGCGAAC TCATTCCGGC GGTGAAGGGG
ATCTGGGCGG GTGATTACGC CCACGACGGC GAGTTCTTCA AGTTTCCGGC CACGACCTCG
TCACCGAAGC CGCTGCAGAA GCCCCATCCG CCGATATGGG TTGCTGCGCG CGACCCCAAC
TCGCACGAGT TTGCCGTTTC GAACGGCTGC AATGTGCAGG TGACGCCACT CTGGCAGGAC
GACGAGGAGG TTCGGAGCCT GATGGGACGG TTCAACGACG CCTGCGCCAA GGATCCAGAG
GTCCCGCGCC CGAAGATCAT GCTGCTGCGG CACACCTATG TCGGCTCCGA CGAGGCGGAT
ATCGCGCAGG CAGCTCATGA GATGAGCGTA TACTACAATT ACTTCTTCGC CTGGTTCAAG
AACGAAAGAC CGATCAGACA AGGCCTCATT GATCGGATTC CGGACGAGGA AATTGCCGCC
AATGCCATGC TCTCAGGCGA GGCAATGCGA CGCAACAACG TCGTCGGCGC AGCCGACGAG
GTCATCGCCC GCATCAAGAG CTACGAGGCA ATGGGATATG ACGAATATTC CTTCTGGATA
GACACAGGCA TGACCTTCGA GCGCAAGAAG GCTTCGCTCG AACGCTTCAT CGCCGATGTC
ATGCCAGCAT TTGCGGAGTA G
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| Protein sequence | MKFSLFVHME RLDASQDHRT LYEEFIKLCE VADKGGMHAI WTGEHHGMEF TIAPNPFITI
ADLARRTKTV RLGTGTVIAP FWHPIKLAGE AAMTDLICEG RLDIGIARGA YSFEYERLLP
GLDAWSAGQR MRELIPAVKG IWAGDYAHDG EFFKFPATTS SPKPLQKPHP PIWVAARDPN
SHEFAVSNGC NVQVTPLWQD DEEVRSLMGR FNDACAKDPE VPRPKIMLLR HTYVGSDEAD
IAQAAHEMSV YYNYFFAWFK NERPIRQGLI DRIPDEEIAA NAMLSGEAMR RNNVVGAADE
VIARIKSYEA MGYDEYSFWI DTGMTFERKK ASLERFIADV MPAFAE
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