| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_6239 |
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| Symbol | |
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| ID | 5320541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 1160267 |
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| End bp | 1161385 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640777841 |
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| Product | transposase IS116/IS110/IS902 family protein |
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| Protein accession | YP_001314773 |
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| Protein GI | 150378178 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3547] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.900844 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGAAG ATAGCGTCAT TTTCATCGGC CTGGATACTT CGAAGCTGAA GATTTCTGTG
GCGATAGCCA ATGGAAGCCG CAACGGCGAG GTACGGTTTT TCGGCGACAT TTCCTCGGAG
CCGGCATCAG TAGCATCGAT GGTCAGCAAG CTTTCCAAGC GCGGAGCTAA GCTTCACTTT
TGCTATGAAG CTGGTCCCAC GGGTTACGGT CTTTACCGGC AGATTGTCGA ACTGGGGCAT
GATTGCGTGG TCGTGGCGCC GTCACTGGTA CCCAAGCGTG CGGGCGATCG GGTGAAGACA
AACCGCCGGG ATGCCATGAG TCTGGCGCGC CTGCACCGGG CGGGCGAACT GACCGCGGTC
TGGGTCCCAG ATGAAGGCCA TGAGGCGATC CGCGATCTGG TGCGGGCGCG TGAGGCGGCC
AGCGACGCGC TGAAGCAGGC CCGTCAGCAA CTTCAGTCCT TCTTGTTGCG TCATGGCAGG
ATCTATGCCG GCCGCGAACC ATGGACGCGT GCCCATCGAA GATGGCTAAC GTGCCAGGCC
TTCGATCATC CCGCCCACCA AATCCTGCTG GCGGAATATT GCCAGGCTGT CGCGGATGCC
AGCGTGCGCC TGGATAGGCT GACCAAGCTG GTCGTCGAGA CCGCGGCATC CTGGTCAATG
GCGCCGGTTG TGGCCGCCTA CCAGGCGATG CGCGGCGTCG CGTTCATGAC GGCGGTCACC
TTTGTCGTCG AAATCGGCGA TGTCAGGCGC TTTGATAATC CTCGCCAGCT GATGGCGTAT
CTCGGTCTCG TGCCGTCGGA AAGCTCAACC GGCGAACGGG TCAAGCGTGG CGGGATCACG
AAGGCGGGCA ACACAAGAGC TCGAAGGGTA CTCATTGAGG GCGCTTGGAC ATATCGCTTT
CCGGCCCGCG TGAGCCCAAA GATCCAGGCG CGGCTGGACG ACCTGCCAAG AACGGTTCGC
GAGATTGCTT GGAAAGCCCA GGTAAGGCTT TGCGCACGCT ATCGAAAACT ACTCGCGGCA
GGCAAGCCGA AGGTCGTCGC GGTTACCGCC ATTGCGCGAG AAATGGCAGC GTTCCTATGG
GCGATCGGGC AGGAGATCGC TCCCACAGCA AAAGCCTAA
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| Protein sequence | MKEDSVIFIG LDTSKLKISV AIANGSRNGE VRFFGDISSE PASVASMVSK LSKRGAKLHF
CYEAGPTGYG LYRQIVELGH DCVVVAPSLV PKRAGDRVKT NRRDAMSLAR LHRAGELTAV
WVPDEGHEAI RDLVRAREAA SDALKQARQQ LQSFLLRHGR IYAGREPWTR AHRRWLTCQA
FDHPAHQILL AEYCQAVADA SVRLDRLTKL VVETAASWSM APVVAAYQAM RGVAFMTAVT
FVVEIGDVRR FDNPRQLMAY LGLVPSESST GERVKRGGIT KAGNTRARRV LIEGAWTYRF
PARVSPKIQA RLDDLPRTVR EIAWKAQVRL CARYRKLLAA GKPKVVAVTA IAREMAAFLW
AIGQEIAPTA KA
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