Gene Smed_6119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_6119 
Symbol 
ID5320421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp1047442 
End bp1048218 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content52% 
IMG OID640777756 
Producthypothetical protein 
Protein accessionYP_001314688 
Protein GI150378093 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCGG CTGCTTTGAA ATTCGTATCC GTAACAAAAC TTCCTAGCGA CGACGATCTT 
GGGGAGCTGC TGGATAAGCT GCGGGGTCTC CCTCACGCTG CCGCGCCAAT CCGCTCTTTG
GCAGATAATA AACAAACTGC CCAAGTCAAC GCGGGAAGTC TGACTTCGTT CACCCAGAAT
CTTTCTGGCC AGAACAAAAG TGACGTGCAG AACTCGACCC TTTTTGCGCA ACTGGCGTCA
GACCGCGCTT ATGATCGTTA TAACTCGCCC ATGGACTGGT ACAAGAACTA CATTAATGTC
CTAGGTCAAA TTGGCTGGAA CCAGCCGGGC TTTGCTTTCG ATACCTATAC CTCTGGAGGT
TCAACGGTTC AACTCAGTGA GGAGGTCTTG GGTATCCTCG CCGCGATTGC AACCGGAGAC
GAGATCGCCA TGGTAGAGGC GACGATGAAT GGCCTCAAGG GTCTCAGCGA CGAATCAAAA
CAAATGACCA TTTGGGATGC AAAGTCGAAT GACGGCAACA ACGGGAATTT CCAAATATTT
CCGGTCGATG CTCTGCCCAA CGGGGACGTC GTGATGGTGC TTGATGGCAT GCAGTTCAAT
GCATCCACCA CTCATTCCCG GTTCTTGTGG TGGACATGGG AATCCTCTAG CATCCGCATA
CAGCGCGCTG CCAACAAATT CGTGCTCAAC GATAGCGTCT ATTCGCAGGT TCGGCAGGCT
GTTATCGATA AACTCGGTGA TCGCGCCGCG CAGTTGGTCG CAGACATTCC CATTTAA
 
Protein sequence
MTSAALKFVS VTKLPSDDDL GELLDKLRGL PHAAAPIRSL ADNKQTAQVN AGSLTSFTQN 
LSGQNKSDVQ NSTLFAQLAS DRAYDRYNSP MDWYKNYINV LGQIGWNQPG FAFDTYTSGG
STVQLSEEVL GILAAIATGD EIAMVEATMN GLKGLSDESK QMTIWDAKSN DGNNGNFQIF
PVDALPNGDV VMVLDGMQFN ASTTHSRFLW WTWESSSIRI QRAANKFVLN DSVYSQVRQA
VIDKLGDRAA QLVADIPI