Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_6107 |
Symbol | |
ID | 5320409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | - |
Start bp | 1039381 |
End bp | 1040751 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640777747 |
Product | TfuA domain-containing protein |
Protein accession | YP_001314679 |
Protein GI | 150378084 |
COG category | [S] Function unknown |
COG ID | [COG3482] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.620154 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTGTCG AGACCAACAA TGAGATTGCC GTTTTTCTGG GCCCGTCCTG CTCGATTGAA GAAGCTAAAA GCATCCTGCC GGAGGCAGAT TACTTTCCGC CCGCGGCTCG TGGCTCCATC TACGGTATTA TCAATGATGG ATACCGGATG ATCGTCCTTC TCGACGGTCT GTTCTACGGA CAATATTCTG TTTGGCATAA GGAACTCCTG TTCGCCCTGG ATTGCGGCAT TGAAGTAATC GGCGCAACGA GCATGGGTGC CCTGCGGGCG GCCGAACTGG ACTGCGAGGG CGTGACCGGT GTCGGGCAGA TCTACCAGTG GTTTCGTGAC GGCGAAATCG ATGGCGATGA CGAAGTGGCT CTGCTCCACC AGAGTTCCGA GGGAGCTTAC GCGCCTCTTT CCATCCCTCT CGCCAATTTG CGTTGGAATC TGCGCCTTGC CCGAAGAGAA TGTATGATCG ACGAGCAGCA GGAAGCGCGG ATTCTGGACC ATGCAAAGGC CCTGTGTTTC CAGGACCGAA TGATGGAGGT CGTGCTTTCG CCGCTGGCAA AGGAACTGGA TGTTTCTGGC TTGCAAAAAT GGCTTGAAAC GCATGGAGAG GATCTAAAAA AAAGGGATTG CTTAGAAGCG TTGCGCTTTG CCGCCAGCCG GATCGCGACC CTTGGCCCCG CGCAGCCTCC CCGTCTTCGC GCCTATGAGA CGGTGCATAC GCTGATCGGC ATCGAGTATT TCACGCACGA GCGGTTGAAT GCCATCTGCG CAAAACGGCA AGGCAAGGCC ATGCCGCTCT CGCAGTACAC CGAGCGAGTT GCCGTGGGAG ATCCCTCCTA TCGTAGCTAT CTGCGCGCTC GCGCTTGCCA GCGCCTTATC AATGGCTGGG CTCGGGAACT TCACCTCGAA ATCACCCCGG CGCCCATTCT GCCCCAATGG TTACCCAATC GGTTTGACCT CGCTCACCGC AGGGCAACCG GCCTGACGCT AATCGATATT GCACGTGAGG GACGGGAAGC CGCCTTCACC GCAGGCGTCA TCGGATCTCT CTCATCACCC GCCAGCCGCA GCCTCGTCTC CGATATTGAC CGGCAACTGG CAGAGGCAGG TTTCTCGGCA TGGGGCGCGG GAGCCGAAAT CACACATTTG GATGGCCGCC TTGTTTATAC GCTTCGTCGC CTGGGGCGCG AAAAGGGCAT TTTGCCGGAC GAGAATGAAG ATGCAGATAC CGCCGAAGCG GCGCTCCACT ACCTTGAATG GGTCTATCGC ACCGGCTTGC AGCACTTCGG CTACACATTT GACGCGGCAA CCGAAATCCT CCTGGCACAC CAATTTGCCG ATCGACTTGA CGACATTCTC GGATTGAGGG CTGCATCATG A
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Protein sequence | MVVETNNEIA VFLGPSCSIE EAKSILPEAD YFPPAARGSI YGIINDGYRM IVLLDGLFYG QYSVWHKELL FALDCGIEVI GATSMGALRA AELDCEGVTG VGQIYQWFRD GEIDGDDEVA LLHQSSEGAY APLSIPLANL RWNLRLARRE CMIDEQQEAR ILDHAKALCF QDRMMEVVLS PLAKELDVSG LQKWLETHGE DLKKRDCLEA LRFAASRIAT LGPAQPPRLR AYETVHTLIG IEYFTHERLN AICAKRQGKA MPLSQYTERV AVGDPSYRSY LRARACQRLI NGWARELHLE ITPAPILPQW LPNRFDLAHR RATGLTLIDI AREGREAAFT AGVIGSLSSP ASRSLVSDID RQLAEAGFSA WGAGAEITHL DGRLVYTLRR LGREKGILPD ENEDADTAEA ALHYLEWVYR TGLQHFGYTF DAATEILLAH QFADRLDDIL GLRAAS
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