Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_5987 |
Symbol | |
ID | 5320289 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | + |
Start bp | 944753 |
End bp | 945865 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640777663 |
Product | hypothetical protein |
Protein accession | YP_001314595 |
Protein GI | 150378000 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.373978 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATTCTT ACAGCATTAG GACGCTCGAT GAGCTGAAGG AATTCCTCCA CCGGGCAATG CAGCTCGAAC ATGCGACGAT TCCGCCGTAT ATGACGGCGC TTTACTCGAT CAAGCCCGGT TCCAACCAGG CTGCAACCCA GATTCTGCGC GTGATCGTCG TGGAAGAAAT GCTGCATCTG ACCATCGCGG CCAATATTCT TAATGCCGTC GGCGGCACAC CGGATCTTGC CAGCCCGGGC TTCGTAGTCA GCTACCCCAC CCCCTTGCCG GACGGTGAGA CCGATTTCCA AGTCAGCATC CAGGCTTTCA GCCGCGAGGC CCTGGCAACT TTCCTGAAAA TCGAGCGGCC GGCCCAGCGA CCCCACCATC TCGTTGGCAA GGGCCTGATC GAACGCAAGA CCTCCCCGCA TACGATAGCG CTTGGCAGCC ATCCAAGGCA CGAGAACCTC CATTTTTACA GTATCGGCGA GTTCTACTCG ACCATCACAG AAGGCATCAA GTATCTGGAA GCCGAAGCGC GTCGGGCGGG CACAACCATT TTTACCGGCG ACACTTCGCG CCAGATCACC TCGGAATACT ACTATTCCGC CGGCGGCGAG CTGTTTCCCG TCACCGATCT GAAAAGTGCC TTGGAAGCCA TCGAGCTCAT CATCGAACAG GGCGAAGGCG ACGGTGGCGG TATCTACGAC GATGACGAGC ACGAACTGGC CCATTACTAT CGTTTCGACG AGTTGGTCAA AGGCCGCTAC TACCAGAAGG GCAACCGGCC GGGCCACCCC ACAGGTCCGC AATTGCAGGT CGACTGGGAA GGCGCCTATC CCCTCAAAGC AAACCTGAAA GTGGCGGAGA TAGAGGACCC GGAACTGCTT GAAGCGGCAA CGGCCTTCAA CACGCGCTAT GGCGAATTTC TGCAGCTCTT GACGCGTGCA TATAACGGCG AGCCGCGCCT GCTGCTGGAA GCCGTTCCGA TCATGTTCGA ATTCCGCAAC ATGATCCTCG AGCTCATCCG CAATCCCCTG CCGAACCATC CCGGTATGAA CGGCGGCCCC ACCTATGAGA TCCCCGGGAA TATACAGGCA GCCGGCAGCC GGCAGGCGGA GGTGATCGCA TGA
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Protein sequence | MYSYSIRTLD ELKEFLHRAM QLEHATIPPY MTALYSIKPG SNQAATQILR VIVVEEMLHL TIAANILNAV GGTPDLASPG FVVSYPTPLP DGETDFQVSI QAFSREALAT FLKIERPAQR PHHLVGKGLI ERKTSPHTIA LGSHPRHENL HFYSIGEFYS TITEGIKYLE AEARRAGTTI FTGDTSRQIT SEYYYSAGGE LFPVTDLKSA LEAIELIIEQ GEGDGGGIYD DDEHELAHYY RFDELVKGRY YQKGNRPGHP TGPQLQVDWE GAYPLKANLK VAEIEDPELL EAATAFNTRY GEFLQLLTRA YNGEPRLLLE AVPIMFEFRN MILELIRNPL PNHPGMNGGP TYEIPGNIQA AGSRQAEVIA
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