Gene Smed_5987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5987 
Symbol 
ID5320289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp944753 
End bp945865 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content58% 
IMG OID640777663 
Producthypothetical protein 
Protein accessionYP_001314595 
Protein GI150378000 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.373978 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATTCTT ACAGCATTAG GACGCTCGAT GAGCTGAAGG AATTCCTCCA CCGGGCAATG 
CAGCTCGAAC ATGCGACGAT TCCGCCGTAT ATGACGGCGC TTTACTCGAT CAAGCCCGGT
TCCAACCAGG CTGCAACCCA GATTCTGCGC GTGATCGTCG TGGAAGAAAT GCTGCATCTG
ACCATCGCGG CCAATATTCT TAATGCCGTC GGCGGCACAC CGGATCTTGC CAGCCCGGGC
TTCGTAGTCA GCTACCCCAC CCCCTTGCCG GACGGTGAGA CCGATTTCCA AGTCAGCATC
CAGGCTTTCA GCCGCGAGGC CCTGGCAACT TTCCTGAAAA TCGAGCGGCC GGCCCAGCGA
CCCCACCATC TCGTTGGCAA GGGCCTGATC GAACGCAAGA CCTCCCCGCA TACGATAGCG
CTTGGCAGCC ATCCAAGGCA CGAGAACCTC CATTTTTACA GTATCGGCGA GTTCTACTCG
ACCATCACAG AAGGCATCAA GTATCTGGAA GCCGAAGCGC GTCGGGCGGG CACAACCATT
TTTACCGGCG ACACTTCGCG CCAGATCACC TCGGAATACT ACTATTCCGC CGGCGGCGAG
CTGTTTCCCG TCACCGATCT GAAAAGTGCC TTGGAAGCCA TCGAGCTCAT CATCGAACAG
GGCGAAGGCG ACGGTGGCGG TATCTACGAC GATGACGAGC ACGAACTGGC CCATTACTAT
CGTTTCGACG AGTTGGTCAA AGGCCGCTAC TACCAGAAGG GCAACCGGCC GGGCCACCCC
ACAGGTCCGC AATTGCAGGT CGACTGGGAA GGCGCCTATC CCCTCAAAGC AAACCTGAAA
GTGGCGGAGA TAGAGGACCC GGAACTGCTT GAAGCGGCAA CGGCCTTCAA CACGCGCTAT
GGCGAATTTC TGCAGCTCTT GACGCGTGCA TATAACGGCG AGCCGCGCCT GCTGCTGGAA
GCCGTTCCGA TCATGTTCGA ATTCCGCAAC ATGATCCTCG AGCTCATCCG CAATCCCCTG
CCGAACCATC CCGGTATGAA CGGCGGCCCC ACCTATGAGA TCCCCGGGAA TATACAGGCA
GCCGGCAGCC GGCAGGCGGA GGTGATCGCA TGA
 
Protein sequence
MYSYSIRTLD ELKEFLHRAM QLEHATIPPY MTALYSIKPG SNQAATQILR VIVVEEMLHL 
TIAANILNAV GGTPDLASPG FVVSYPTPLP DGETDFQVSI QAFSREALAT FLKIERPAQR
PHHLVGKGLI ERKTSPHTIA LGSHPRHENL HFYSIGEFYS TITEGIKYLE AEARRAGTTI
FTGDTSRQIT SEYYYSAGGE LFPVTDLKSA LEAIELIIEQ GEGDGGGIYD DDEHELAHYY
RFDELVKGRY YQKGNRPGHP TGPQLQVDWE GAYPLKANLK VAEIEDPELL EAATAFNTRY
GEFLQLLTRA YNGEPRLLLE AVPIMFEFRN MILELIRNPL PNHPGMNGGP TYEIPGNIQA
AGSRQAEVIA