| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5985 |
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| Symbol | |
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| ID | 5320287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 941255 |
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| End bp | 942697 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640777661 |
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| Product | glucan 1,4-alpha-glucosidase |
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| Protein accession | YP_001314593 |
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| Protein GI | 150377998 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.377487 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGTTG CATTTCGCAG TAAGCCAGTG ACAGTTGAGG ACCCGGCATA TAGAGGTCTG
GCTATCGGCA CTTATGCGCC TGCAGTCACA CCGGCGCCTG CCTTCGCGCA GACCGACCTG
GCTGCATTGT CGCGCTACTA TTCTCTTCTG ATGATGCGCA ACATCACCAG CGACGGCTAC
GTCATCGAGG ATCCAGCATC GCCCGGCGTC TTTTCGGTAC CGGGCTGTGT CATCGCCGCG
CCTTCCTATC CAGCGAACAC GCCGGGTGTC GACCAGGACT ATGTTTTCAA CTGGGTCCGC
GACGGAGCTA TGACGGCCAT CGAGATCGCG CTTGCCGACT TGCCGCGCGT TTCGGGCGGG
GGTGTGCCGA GCCTGATCGA CTACGTGAAC TTCGCCGCGC TGTGTCAGGC GAATGCGAAG
AATTCCGCGA CCGCCACACT TGGCCATGCC TGCTTCACCA TCACCGGCAA GGTTCGTCCG
TGGTCGGAGC AAAATGACGG GCCGGCCATT CAGTCGATCG CCATACTGAC CTTGTTCGGT
CAGTTGGATG GCGCCACGCA GAAAATCGCT AAACGACTGG TTGAGACTAA CCTCTCTTAT
CTTCTCGAAG TTTACCAGAA CAAGACCACA AATCTCTGGG AGGAGTATGA GGGCTATTCC
TTTTTCGCAA GAGCCGTACA GCTGCGCTTT TTCCGGGAGA TTTCCAGAAA CACGATCGCT
ATTGCCGTGC CTGCCGGGGT GGCCGATGCC ATCTCCTGGC TGCAAACCCA GCTGGCCAAC
CACTGGAATG GGCAGCTCTA TGTGAGCGTT CTGGATGTCG CGGCGCAAGC CGGTTATGAC
GCGAACATCG ATATCGTCTC TTCGGTCTGC TATGGCGGGA TCCATCCGGC TGACACCAAG
CTTCTGGCAA CGGCGGCAAT CCTGCGGCGC CAGTGGGCTG ATATTTCGTC TTCGAGCTAT
TTCCCAATCA ATGGCGCCGA CGCGGCCAAA GGGCTCGGAC CCGCCTTCGG GCGCTATCCG
GGCGACCATT ACGATGGCGA TGTGGCGGCT CCGGTGGTCG GCGGGCATCC CTGGGCTCTG
TGCACCGCCA ACTTCGCCGA GTTTCAATAT CGGCTTGCCA ATGCCATAGA CGCCAGCGGC
GCCATTCCTC TCGATCAGTT CTCCGAACCC TTCTTCGCTG AATTGGGGCT TGGCGCATCC
AGCAGCGCCG CCGACGCGTC AACTGCCTTA CGCGCTTCGT CTGACGCCAT GCTGCGCGCC
ATCGTCTACC ACAGCGATCA CTACGAACTG AGCGAGCAGT TCGATGGAAC CACTGGCTAT
GAGAAAAGCG TCCGGAACCT GACCTGGAGC TACGCCTCTT TTCTCTCGGC AGTCAGAGCC
CGCTCCGGCG GTATCCCAGC CGGTAAGAAC AAACCCCGAA ACTCCCGCAG CCGAAGTTCG
TGA
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| Protein sequence | MTVAFRSKPV TVEDPAYRGL AIGTYAPAVT PAPAFAQTDL AALSRYYSLL MMRNITSDGY
VIEDPASPGV FSVPGCVIAA PSYPANTPGV DQDYVFNWVR DGAMTAIEIA LADLPRVSGG
GVPSLIDYVN FAALCQANAK NSATATLGHA CFTITGKVRP WSEQNDGPAI QSIAILTLFG
QLDGATQKIA KRLVETNLSY LLEVYQNKTT NLWEEYEGYS FFARAVQLRF FREISRNTIA
IAVPAGVADA ISWLQTQLAN HWNGQLYVSV LDVAAQAGYD ANIDIVSSVC YGGIHPADTK
LLATAAILRR QWADISSSSY FPINGADAAK GLGPAFGRYP GDHYDGDVAA PVVGGHPWAL
CTANFAEFQY RLANAIDASG AIPLDQFSEP FFAELGLGAS SSAADASTAL RASSDAMLRA
IVYHSDHYEL SEQFDGTTGY EKSVRNLTWS YASFLSAVRA RSGGIPAGKN KPRNSRSRSS
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