Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_5629 |
Symbol | |
ID | 5319931 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | - |
Start bp | 596672 |
End bp | 597409 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640777371 |
Product | hypothetical protein |
Protein accession | YP_001314303 |
Protein GI | 150377708 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCACTTGT CATCAACCGC CCGCGCTGCC CTGCCCGCCT TGGCAGCTCT GATCGCCGCC TATCTTCTGC TTGCCTATTT CCTGGTGCCC GAGATGTGGA TCTTTCGCGA GCATCGCCTT CCACACTTCG ATTCGATGGT GACGGCGACC GCCGATGATA TCCCCGGTGA CCCGATCAAC GTCGGTCTGG TAGGCTCAAA AGCACAGGTG ATGGGCGCCT TTGCGGCTGC TGGTTGGCAT GCCGCCGATG CAATTACCTG GCGCTCCTCG ATCGACATCG GCCTTAGCGT TGTACTTCAC AGGCCGGACA GCGCCGCACC GGTAAGCCCG CTGTTTTATC GCGGCCGAAA GCAGGACCTA GCCTTCGAAA AAGCGGTTGG GAACAGCGCC GATCAACGTC ATCACGTGCG GTTCTGGCAA ACGGATCAGA GCGACAACTA CGGCCGACCG TTCTGGTTCG GTTCGGTCAC CTTCGATCGC GGGGTCGGAC TCAGTCATGA CACAGGTCAG ATCACTCATC ACATCGCCGC AGACGTTGAC GTCGAACGAG ACGGTCTTAT CCGTGACCTG CAAGCCGCAG GGCAAATTGC GTCAACCTAC GACATCGGCG GCGTCGGGGC GACGATGAAT GGTCGCAACG GTGGCGGCGA TTCCTACTTT ACCGATGGCT TCGCGTTAAT CGGCATTGTG CGAGCAGAGC CGAGAACAGG CAAGGCCCGC GCTAATACTT CCCGGTAG
|
Protein sequence | MHLSSTARAA LPALAALIAA YLLLAYFLVP EMWIFREHRL PHFDSMVTAT ADDIPGDPIN VGLVGSKAQV MGAFAAAGWH AADAITWRSS IDIGLSVVLH RPDSAAPVSP LFYRGRKQDL AFEKAVGNSA DQRHHVRFWQ TDQSDNYGRP FWFGSVTFDR GVGLSHDTGQ ITHHIAADVD VERDGLIRDL QAAGQIASTY DIGGVGATMN GRNGGGDSYF TDGFALIGIV RAEPRTGKAR ANTSR
|
| |