Gene Smed_5629 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5629 
Symbol 
ID5319931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp596672 
End bp597409 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content60% 
IMG OID640777371 
Producthypothetical protein 
Protein accessionYP_001314303 
Protein GI150377708 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACTTGT CATCAACCGC CCGCGCTGCC CTGCCCGCCT TGGCAGCTCT GATCGCCGCC 
TATCTTCTGC TTGCCTATTT CCTGGTGCCC GAGATGTGGA TCTTTCGCGA GCATCGCCTT
CCACACTTCG ATTCGATGGT GACGGCGACC GCCGATGATA TCCCCGGTGA CCCGATCAAC
GTCGGTCTGG TAGGCTCAAA AGCACAGGTG ATGGGCGCCT TTGCGGCTGC TGGTTGGCAT
GCCGCCGATG CAATTACCTG GCGCTCCTCG ATCGACATCG GCCTTAGCGT TGTACTTCAC
AGGCCGGACA GCGCCGCACC GGTAAGCCCG CTGTTTTATC GCGGCCGAAA GCAGGACCTA
GCCTTCGAAA AAGCGGTTGG GAACAGCGCC GATCAACGTC ATCACGTGCG GTTCTGGCAA
ACGGATCAGA GCGACAACTA CGGCCGACCG TTCTGGTTCG GTTCGGTCAC CTTCGATCGC
GGGGTCGGAC TCAGTCATGA CACAGGTCAG ATCACTCATC ACATCGCCGC AGACGTTGAC
GTCGAACGAG ACGGTCTTAT CCGTGACCTG CAAGCCGCAG GGCAAATTGC GTCAACCTAC
GACATCGGCG GCGTCGGGGC GACGATGAAT GGTCGCAACG GTGGCGGCGA TTCCTACTTT
ACCGATGGCT TCGCGTTAAT CGGCATTGTG CGAGCAGAGC CGAGAACAGG CAAGGCCCGC
GCTAATACTT CCCGGTAG
 
Protein sequence
MHLSSTARAA LPALAALIAA YLLLAYFLVP EMWIFREHRL PHFDSMVTAT ADDIPGDPIN 
VGLVGSKAQV MGAFAAAGWH AADAITWRSS IDIGLSVVLH RPDSAAPVSP LFYRGRKQDL
AFEKAVGNSA DQRHHVRFWQ TDQSDNYGRP FWFGSVTFDR GVGLSHDTGQ ITHHIAADVD
VERDGLIRDL QAAGQIASTY DIGGVGATMN GRNGGGDSYF TDGFALIGIV RAEPRTGKAR
ANTSR