| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5621 |
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| Symbol | |
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| ID | 5319923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 588263 |
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| End bp | 589162 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640777364 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001314296 |
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| Protein GI | 150377701 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.450042 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.697509 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAACC TGAAACCTCT CTTCGCCAGA CTGAACAAGA TTCCCAGAGC GGCCTTAATC
ACCATAGGAC TGTTCGTCGC CCTCGGTACT TTTGCGCCCT GGTTGGCTCC TCAGGACCCG
AGCGCCCAGA ACCTCCTCGA GGCCGGCTCT GGTCCGAGTG CCGCCCATTG GCTCGGGACC
GACCATCTCG GCCGCGACAC TCTCAGCCGC CTGCTTATCG CGGCTAACAC GTCGCTGGTC
AGCGTCGGCT CTGTTCTCGG CATCGCCATG ACGATCGGCA TCGCCATGGG GACGATCGCC
GGCTACCACC GCGGCTGGGT CGACGATGTT CTGATGCGTG TGGTCGACGT GGGTCTTTCC
ATACCGAGCC TGATCATCGC GCTCGCTGTC ATCGGCATCG TTGGCCCTGG TTACTGGACA
ATGGTGTTGG CGCTCGCTCT CGCCTGGTGG CCGATGAGCG GCCGCATCAG CCGCGCCGTC
GCCGTCAGCA TCATGAGCAA GCCGCATATC GAGGCGTTGC GCGTACTGGG CGCCAGCCCC
TGGCGCATCT ATTTCAATCA TCTGCTGCCA GGCACGATCG GTGCGGTGAT GGTCTATGCG
ACGGCCGACG CCGGTGTCGC AGCACTTGCA GTCGCCACGC TTAGCTTTCT GGGCCTCGGG
ATTCAGCCAC CAACGCCCGA GTGGGGTCAA ATGCTCGTTG ACGCGTTGCC CTATCTCGAG
TCCGACCCGC GCCAGGTGCT CCTGCCAGGC CTTGCCCTGA CCGCGGCGGT CATCGGCTTC
AATACCCTTG GCGAATCGAT AGCGCTCAAC CGCATTCCGA AGCCACTCAC CCGGCGCACG
CTAGCGGCGC GCCGCATCGA GGTCGCAGGT TGGGGGAAGG AGAGTCTCGA TGCAAAATGA
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| Protein sequence | MKNLKPLFAR LNKIPRAALI TIGLFVALGT FAPWLAPQDP SAQNLLEAGS GPSAAHWLGT
DHLGRDTLSR LLIAANTSLV SVGSVLGIAM TIGIAMGTIA GYHRGWVDDV LMRVVDVGLS
IPSLIIALAV IGIVGPGYWT MVLALALAWW PMSGRISRAV AVSIMSKPHI EALRVLGASP
WRIYFNHLLP GTIGAVMVYA TADAGVAALA VATLSFLGLG IQPPTPEWGQ MLVDALPYLE
SDPRQVLLPG LALTAAVIGF NTLGESIALN RIPKPLTRRT LAARRIEVAG WGKESLDAK
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