| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5554 |
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| Symbol | |
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| ID | 5319856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 519007 |
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| End bp | 520017 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640777303 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_001314235 |
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| Protein GI | 150377640 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0347599 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGGA TCACATTGCA GGACATCGCT GATCACACAG GCCTGTCCAA ATTCGCTGTC
TCCTGCTCCC TTTCGGGAAA GCCGGGGGTC AGCGACACCA CGCGAAAACG CGTGCAGGAT
GCCGCCGTAC AACTCGGCTA TCAACGCTTA AAACCCGCAG AAGAGCGGCG TGAAGTCACC
CTGATTTTCC ATGATCAAGT CGACAGTGTC AGCTATGAGC TGCGAACGAT GCTGCAAGAC
GGGATGCAGC GCGAAGCGCA TCGGCTCGGC CAGCCGGTCA GGCTTCAATG GACGCATGAT
GCCAATCGGG TGAAAGCCAT GGTCAAGGAT AGTGCCGGGA TCATCCTGGT CGGTCCTCAC
GAACAGAAAA CGCTCGACAT CCTGAGAGCC TCCGGCGTTC CCGTTGTGCG TCTCGGCTGG
GTCGCCCCCC TCGAACAGGC CGATCATGTC GGCGGCACCG ACCACGAGGC AGGGATTGCA
GTTGGCGAAT ACCTGATCGG CCTCGGCCAT CGGGACATCG CCTTTCTCCA AGGGGAGGAA
GGGTATCGCG GCCGCATGGA GCGATATCAC GGTCTGCGCG AAAGTATCGA ACAGTATCCC
GATGCGCGGC TGCACAATTT GCACTTCAAG GAGGACGGGG GCTTCATTCC GGCGCTTCAA
TCTCTCCAGA CGACGGGAAT TGCGCCAACG GCGCTGTTCT GCGCGCATGA CGGACTGGCT
CTCACCGCCG TTTCGGAGCT CCTAGCGCGG GGTTACCGCA TTCCGGAAGA CATGTCCGTT
GTCGGCTTCG GTGATTTTTC TGCCGCAACG CAAATATCGC CACAGCTAAC CACCATCAAA
GTGCAAGGAC TTGAAATGGG GGCGACAGCG TTGCGGCTTC TGCTAGAGCG CATTGAAACA
CAAGGCAACA CCGTGCCTGC CAGACGCATT CTGATTGCAT CTACCTTCGT TGAGCGTCGA
TCATCGGGGC CTGCTCCGAA GCACGGAAAG AGCCTTGACA GACGAAAATG A
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| Protein sequence | MSRITLQDIA DHTGLSKFAV SCSLSGKPGV SDTTRKRVQD AAVQLGYQRL KPAEERREVT
LIFHDQVDSV SYELRTMLQD GMQREAHRLG QPVRLQWTHD ANRVKAMVKD SAGIILVGPH
EQKTLDILRA SGVPVVRLGW VAPLEQADHV GGTDHEAGIA VGEYLIGLGH RDIAFLQGEE
GYRGRMERYH GLRESIEQYP DARLHNLHFK EDGGFIPALQ SLQTTGIAPT ALFCAHDGLA
LTAVSELLAR GYRIPEDMSV VGFGDFSAAT QISPQLTTIK VQGLEMGATA LRLLLERIET
QGNTVPARRI LIASTFVERR SSGPAPKHGK SLDRRK
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