Gene Smed_5521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5521 
Symbol 
ID5319823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp485753 
End bp486115 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content56% 
IMG OID640777274 
Productresponse regulator receiver protein 
Protein accessionYP_001314206 
Protein GI150377611 
COG category[T] Signal transduction mechanisms 
COG ID[COG4566] Response regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0747322 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAAGC GGAAACAAAT CTCCGTGGTC GATGACGACG AGTCCGTTCG AGAGGCGCTG 
CCAGACCTTC TCCGTTCGTT CGGATTTGAT GTCCATACCT TCGACTCGGC CGAAGCCTTC
CTGCATGCGG GTGCCTTCGC ATTCAGCGAT GGAATGATAC TCGACATTGC CATGCCCGGC
ATGACCGGAC CCGAGCTGTT CAAGGAGCTT ACGAGACGGG GAAACCAGGT TCCGACGATA
TTCGTCACTG CGCTCAAGGA TGAGATCCTG CGAACCCGCC TGATGAAGGA CGGTGCAGTA
GAGTGCCTGT TCAAACCTTT TGGCGATGAG GAACTTCAAG TGGCACTGGC CGCGATAGAC
TAA
 
Protein sequence
MTKRKQISVV DDDESVREAL PDLLRSFGFD VHTFDSAEAF LHAGAFAFSD GMILDIAMPG 
MTGPELFKEL TRRGNQVPTI FVTALKDEIL RTRLMKDGAV ECLFKPFGDE ELQVALAAID