Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_5494 |
Symbol | |
ID | 5319796 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | - |
Start bp | 461127 |
End bp | 461855 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640777249 |
Product | hypothetical protein |
Protein accession | YP_001314181 |
Protein GI | 150377586 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.327919 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGACG GCAGCGAGAA TAGTCTTGCC CGCTGGTCGC GCCGCAAGCT GGCGGCACGG CGGGAACAAG AACCGGCGGC CCCCGAATTG GAACAGGCAT CAGGCGATGT CGCCGAGAAT GACGATCCGG TGGCCTCCTG TCCTGAGCCT AACCTTCCAG AGACGAAAGC AGCGGAGCTT GAGGGTGCGG AGACGGTCGA GCCCCTCCCG CGCCTTGACG ACCTGACTGC CGAAAGTGAC GTTGCGGCTT TCCTGAAGAA AGGCGTTCCG ATGGCGCTGA AGCATGCGGC GCTACGCAAG GTATGGTCAC TCGACCCCGG AATCCGCGAC TTCGTCGGCC CTTCGGAATA TGCTTGGGAC TTCAACAAGG TAGCCTCGAT GGGGGGGTTT GGTCCGCTCG ACGCAAACGA AACCGTCGTG GGCTTCCTGT CGAAAGCGGC GCGTGCCGTT GACACCCTTA CGGAACCGGA GCCCGGTCCA TCCCATGAAC AAAGTGCCGA TGCCCTGCCG GATGCGGTCC TTCCTGTTGA GAATCCGGAG AAATTGACGA CGGAGAAATC AGCCACCGAC GAGCCGCCGG CGATAGAGCC ATCAGCTCAC GAGGCGGCAA CCCATGTAAG CACACCGGTT GAATTCAGAT CTCGCACGGA GTCGCCGGAC AAGGGCAGTC CTTCTGAGCT TCCCAAGGCT TCCTGCGGGC CTCGTCATGG CGGTGCGATG CCACGCTAA
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Protein sequence | MSDGSENSLA RWSRRKLAAR REQEPAAPEL EQASGDVAEN DDPVASCPEP NLPETKAAEL EGAETVEPLP RLDDLTAESD VAAFLKKGVP MALKHAALRK VWSLDPGIRD FVGPSEYAWD FNKVASMGGF GPLDANETVV GFLSKAARAV DTLTEPEPGP SHEQSADALP DAVLPVENPE KLTTEKSATD EPPAIEPSAH EAATHVSTPV EFRSRTESPD KGSPSELPKA SCGPRHGGAM PR
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