Gene Smed_5494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5494 
Symbol 
ID5319796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp461127 
End bp461855 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content62% 
IMG OID640777249 
Producthypothetical protein 
Protein accessionYP_001314181 
Protein GI150377586 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.327919 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGACG GCAGCGAGAA TAGTCTTGCC CGCTGGTCGC GCCGCAAGCT GGCGGCACGG 
CGGGAACAAG AACCGGCGGC CCCCGAATTG GAACAGGCAT CAGGCGATGT CGCCGAGAAT
GACGATCCGG TGGCCTCCTG TCCTGAGCCT AACCTTCCAG AGACGAAAGC AGCGGAGCTT
GAGGGTGCGG AGACGGTCGA GCCCCTCCCG CGCCTTGACG ACCTGACTGC CGAAAGTGAC
GTTGCGGCTT TCCTGAAGAA AGGCGTTCCG ATGGCGCTGA AGCATGCGGC GCTACGCAAG
GTATGGTCAC TCGACCCCGG AATCCGCGAC TTCGTCGGCC CTTCGGAATA TGCTTGGGAC
TTCAACAAGG TAGCCTCGAT GGGGGGGTTT GGTCCGCTCG ACGCAAACGA AACCGTCGTG
GGCTTCCTGT CGAAAGCGGC GCGTGCCGTT GACACCCTTA CGGAACCGGA GCCCGGTCCA
TCCCATGAAC AAAGTGCCGA TGCCCTGCCG GATGCGGTCC TTCCTGTTGA GAATCCGGAG
AAATTGACGA CGGAGAAATC AGCCACCGAC GAGCCGCCGG CGATAGAGCC ATCAGCTCAC
GAGGCGGCAA CCCATGTAAG CACACCGGTT GAATTCAGAT CTCGCACGGA GTCGCCGGAC
AAGGGCAGTC CTTCTGAGCT TCCCAAGGCT TCCTGCGGGC CTCGTCATGG CGGTGCGATG
CCACGCTAA
 
Protein sequence
MSDGSENSLA RWSRRKLAAR REQEPAAPEL EQASGDVAEN DDPVASCPEP NLPETKAAEL 
EGAETVEPLP RLDDLTAESD VAAFLKKGVP MALKHAALRK VWSLDPGIRD FVGPSEYAWD
FNKVASMGGF GPLDANETVV GFLSKAARAV DTLTEPEPGP SHEQSADALP DAVLPVENPE
KLTTEKSATD EPPAIEPSAH EAATHVSTPV EFRSRTESPD KGSPSELPKA SCGPRHGGAM
PR