Gene Smed_5399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5399 
Symbol 
ID5319701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp364442 
End bp364753 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content62% 
IMG OID640777168 
Producthypothetical protein 
Protein accessionYP_001314100 
Protein GI150377505 
COG category[S] Function unknown 
COG ID[COG5489] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.870536 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACCA TCGGCACCTT CACATCCACC GAAAGCGGCT TCACCGGCTC GATCCGCACC 
CTCGCGCTCA ACGTCAAGGC TCGCATCGTT CGCGTCGAAA CTCCTTCGGA CAAGGGCCCG
CACTTCCGCA TCTACGCAGG TTCCGTTGAA CTTGGCGCCG CCTGGCAGAA GCGCTCCAGC
GAGAGCGATC GCGACTACCT CTCGGTCAAG CTCGATGACC CTAGCTTCCC GGCTCCGATC
TACGCGACGC TCGCCGAAGT CGATGGAGAA GAAGGCCTCC AACTCATCTG GTCCCGCCCG
AACCGGGATT GA
 
Protein sequence
MATIGTFTST ESGFTGSIRT LALNVKARIV RVETPSDKGP HFRIYAGSVE LGAAWQKRSS 
ESDRDYLSVK LDDPSFPAPI YATLAEVDGE EGLQLIWSRP NRD