| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5391 |
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| Symbol | |
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| ID | 5319693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 354563 |
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| End bp | 355726 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640777160 |
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| Product | conjugal transfer protein TraB |
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| Protein accession | YP_001314092 |
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| Protein GI | 150377497 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.970188 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.166771 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCGTA ACCGCCTCCA ACCGGTTTTG CTGATCATCA CCGCAACTGC CGCCGGGGCG
GGCGGTTGGA GCGGCCACCC CGCGCTCCTG CCGGTGGCGC TGGCGTTCCC GACCCTTTGG
TCGCAGGCTC GCACGAGACT TGCGGCGGCT CTTGTCGCGG GAGGATACTT TTTGGCGGCA
TCAAGTGGCC TGCCGCAGGG AGTGATGGCC TTCTACTCGG CTGATCTCTG GCCGGGCTTG
CTGCTCTGGC TGTTGGCATC CGCGAGCTTT GTTGCTGTTC ATGCCGTGCT CTGGACGAAG
CGCTCGGGCG TCCGTCCGCT TCGCCAACTG GCGGCGATCG CCCTTATGTC GGTTCCACCC
TTTGGCATCA CCGGTTGGGC GCATCCTGTA ACGGCCGCCG GCATTCTGTT TCCCGAATGG
GGCTGGTGGG GACTGGCTGC AACGACAATC GGTCTCATGG GCCTTGCAAC CCGGATGTGG
CCGCCTATCG CGATCACCTT CGCAAGTTTT TGGCTTTGGT CCGCCACAAA CTGGACCGAC
CCAAAACTGC CCGATGGTTG GCAGGGCGTC GACCTTGAAC TCGGGCGGTC GCTCGGGCGC
GACGCCAGCA TTCAGCGGCA CCTTGATCTG ATTGCAATAG TGAAGAACCA CGCATCTGGT
GGCATTCGGA ATGTCGTTCT GCCCGAAAGC GCATTGGGTT TTTGGACGGC GACCACCAAA
CGGCTCTGGC TAAGGGCTCT GCGGGGCACG AATATCGCGG TGATTGCCGG CGCCGCCACC
GTCGACGCTA ACGGATACGA CAATGTGCTC GTCACTCTGT CTGCCGACGG CGGCAGGATC
ACCTATCGCG AGCGGATGCC TGTACCAGGG TCGATGTGGC AACCTTGGCG GTCGTTGCTC
GGTGAGACCG GCGGTGCGCG GGCGCATTTC TTTGCCAATC CGATCGTCAC TATCGGACCC
AGCCGCGCGG CATCACTTAT CTGCTACGAG CAGCTCATTG TGTGGCCGTT ACTGCAATCG
ATGCTCTACG ACCCGGATCT AATCGTCGCG GTTGGGAACG GATGGTGGGC CAAAGGGACA
TCCATCGTAG CAGTCCAACG AGCCAGCGCC GTCGCCTGGG CCAAGCTCTT CGCAAAACCG
CTTGTTCTTT CCTTCAACAC CTGA
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| Protein sequence | MRRNRLQPVL LIITATAAGA GGWSGHPALL PVALAFPTLW SQARTRLAAA LVAGGYFLAA
SSGLPQGVMA FYSADLWPGL LLWLLASASF VAVHAVLWTK RSGVRPLRQL AAIALMSVPP
FGITGWAHPV TAAGILFPEW GWWGLAATTI GLMGLATRMW PPIAITFASF WLWSATNWTD
PKLPDGWQGV DLELGRSLGR DASIQRHLDL IAIVKNHASG GIRNVVLPES ALGFWTATTK
RLWLRALRGT NIAVIAGAAT VDANGYDNVL VTLSADGGRI TYRERMPVPG SMWQPWRSLL
GETGGARAHF FANPIVTIGP SRAASLICYE QLIVWPLLQS MLYDPDLIVA VGNGWWAKGT
SIVAVQRASA VAWAKLFAKP LVLSFNT
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