Gene Smed_5388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5388 
Symbol 
ID5319690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp353019 
End bp353342 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content55% 
IMG OID640777158 
Productconjugal transfer transcriptional regulator (repressor) protein 
Protein accessionYP_001314090 
Protein GI150377495 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0833515 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATACAG GGAACTCATC CGAGACGAAC GACGAAGAAG AGCCGACCGC TCCCTGCTTC 
GTTTCATTGC AAAAGTCGGA TCTAGAGGTG CTCGCAGTTT CTGCAATTCG TGAGCACCGC
CGCTTAATCG CGGCCGACGA AGGTGTTTAT GAGGAATGGG CTCGCGCAAC CACCGACCCT
TCTGTTCCGG CAGCCGTACT CAAGAGCTTG CAGGATGAGT ATGTCGCGCG TCAGAAGAAA
TCCGAAGCCC AGCAGGATGA ACTTTCGAAA ATCATCGACG CGCTTGGCTA CGTCCCTGAT
CTTTCCTTGG AGGGCGAGCA ATGA
 
Protein sequence
MHTGNSSETN DEEEPTAPCF VSLQKSDLEV LAVSAIREHR RLIAADEGVY EEWARATTDP 
SVPAAVLKSL QDEYVARQKK SEAQQDELSK IIDALGYVPD LSLEGEQ