| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5348 |
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| Symbol | |
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| ID | 5319650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 309602 |
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| End bp | 310501 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640777121 |
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| Product | RpiR family transcriptional regulator |
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| Protein accession | YP_001314053 |
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| Protein GI | 150377458 |
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| COG category | [K] Transcription |
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| COG ID | [COG1737] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.391246 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATG GGAAATCGTC GACGATTCGC ACGAGAATTC GTGAGGCGGC AGCGCAACTG
ACGGCCAGTG AACGGAAGAT CGCCAATGCC ATTCTCGCCG ATTACCCCTT CACCGGCCTG
GAAAACATTC AGGAACTGGC CGCCAAGACC GGCGTCAGTG CGCCATCCAT CACCCGCTTC
GTCAACAAGA TCGGCTGCGG CGGTTTCCAG GATCTGCAAC GGCAGCTGAT TGCCGAACTG
AAGGAGGGGC GGCGCTCGCC TCTCGACCTC AAATCCAGTC AGAAGCCGGT CGGCCATTCG
GATTTCCTGT CGGAATATGT GGCCCGCGTT TCGGCCGTCA TGCGGGAAAT GACAGGGATG
GTTTCGCAGG CGCAATTCGA CATTCTGGCC GAGCTTTTCG CCGATCCTTC GCGCAACATC
TTTCTCCTGG GGGGGCGCGT CAGCGACAGT ATCGCTTCCT TCCTGTCGAT CCATCTGCGG
CAGATCCGCA GCGGCATCTA CCATATGGCT GACAATCCGG AGTTCTGGCC GGAGCATGTT
CTGCGTATGC GCAGGAAGGA TGTCGTATTG CTGATCGATT TCCGTCGCTA CCAGCTCAGC
CTTGCGCGCC TTGCGGCGAA CATCGCTGAA AAGCGCGGCG CAACCATCGT CGTCGTCACC
GACAAGTGGA TGTCGCCGGC CGCGCGCAGC GCTGATCACA TCGTCGCCCT GCCGATCGAA
GCCGGCACGG CCTGGGACAC GGTTGCCGCT GCCATGGCGC TCGTCGAGGC GCTGATCGTG
CGCGTCTCGG AAGCCGATTG GGGGGCGACG CAGAAGCGTA TCAAGGATTG GGACGGCATC
CGCTTTGCTA TGCCGGGCTA TGATCAGGAC AGGATCAACG GGGACGCAGA TGAAACGTGA
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| Protein sequence | MSDGKSSTIR TRIREAAAQL TASERKIANA ILADYPFTGL ENIQELAAKT GVSAPSITRF
VNKIGCGGFQ DLQRQLIAEL KEGRRSPLDL KSSQKPVGHS DFLSEYVARV SAVMREMTGM
VSQAQFDILA ELFADPSRNI FLLGGRVSDS IASFLSIHLR QIRSGIYHMA DNPEFWPEHV
LRMRRKDVVL LIDFRRYQLS LARLAANIAE KRGATIVVVT DKWMSPAARS ADHIVALPIE
AGTAWDTVAA AMALVEALIV RVSEADWGAT QKRIKDWDGI RFAMPGYDQD RINGDADET
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