| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5336 |
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| Symbol | |
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| ID | 5319638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 297247 |
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| End bp | 298773 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640777109 |
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| Product | ABC transporter related |
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| Protein accession | YP_001314041 |
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| Protein GI | 150377446 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3845] ABC-type uncharacterized transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.403197 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGAAG CCGTTCTCGA CATCCGCAAC GTCAGCAAGC GCTTCGGCGA CAATCTCGCC
AATGACGACA TATCGCTGAG TCTTGGCAAG GGCGAGATCG TGGCACTCCT CGGCGAAAAC
GGCGCCGGCA AGACCACCCT GATGAGCATT CTGTTCGGCC ATTACGTGCC GGATACCGGC
AAGGTGCTGG TCGGAGGTCG GGAACTGCCG TCGGGCAAAC CGCGCGCGGC GATCCGTGCC
GGGATCGGCA TGGTGCACCA GCATTTCTCC CTCGCCCCCA ACCTGACGGT GCTGGAAAAC
GTCATGGCCG GCACGGAGAG CCTTTGGCAT CTCCGATCCG GCACACCCGC GGCACGGCGA
AAGCTCAACG GCATTTGCCA GCGGTTCGGC CTGACGGTGG AGCCCGATGC GCGGGTCGGC
GACCTGTCAG TCGGCGAGCA GCAGCGCGTC GAGATCCTGA AGGCACTCTA CAACGATGCG
CGTATCCTGG TGCTCGACGA ACCCACGGCG GTGCTGACCA ATCTGGAGGC CGAGCGGCTG
TTCGCAACGC TGAAGGAGAT GGCACGCGAA GGTCTTTCGC TGATTTTCAT TTCGCACAAG
CTGGACGAGG TCATGGCCGC CGCCGACCGA ATTGTCGTGC TGCGCGGCGG TCGCAAGGTC
GCCGAGCGAC TGGCGGAAAA GACGAACAAG GCCGAGCTTG CCGAACTGAT GGTGGGCCGC
AAGTTATCCC GACCGGTGCG CGAGCCTTCC ACGCCCGGCG AGGAGGTGCT TAAGGCTGCC
GGCGTCAGCG TCATCATCGA TGGAGTGGAA AGACTGAAAT CGGTAGATTT CAGCCTTCGG
GCAGGAGAAG TCCTCGGAAT TATCGGTGTT TCCGGCAACG GCCAGACGAC ACTGGCGCAT
CTCCTGTCGG GTACGGTCGG GCGTGACAGG GGCGAGCTGC TGCTGTTCGG CCAGCCTGTC
GGCGACCTTA CTGTGGATGA GGCCGTCGGG GCCGGAATTG GCCGCATTCC GGAAGATCGC
AACGAGGAGG GAGCGATCGG CGAAATGGCC ATCTGGGAGA ACGCCGTTCT CGAGCGCCTG
CCGCGATTTT CACGCCATGG CCTCGTCGAT CGGCAGGCAG CCCAGGCATT TGCCGGAGAG
ATCATCGATG CCTTCGACGT GCGCGGCGGC AGGCCGCCGA CGCGGACGCG CCTGCTCTCG
GGCGGCAACA TGCAGAAACT CATCCTCGGG CGCAATCTGA TCGACCGGCC GCGCATCCTC
ATTGCAGCGC AGCCGGCGCG CGGGCTCGAC GAAGGAGCTG TCGTCGCGGT CCATGCGCGC
CTGCTCGAAG CGCGGCGCGC GGGAACCGCG GTGCTCCTGA TCTCGGAGGA CCTCGAAGAA
GTGATGGCGC TCGCCGATCG CATTCAGGCC ATTGTCAACG GCCGGCTTTC CCTTCCGATC
GCTGCCGAGA GTGCCGATGC CACGAAACTC GGCCTGATGA TGGCCGGCGA ATGGAATGAC
GAGCACGAGG TTCCCCATGC GCTTTGA
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| Protein sequence | MTEAVLDIRN VSKRFGDNLA NDDISLSLGK GEIVALLGEN GAGKTTLMSI LFGHYVPDTG
KVLVGGRELP SGKPRAAIRA GIGMVHQHFS LAPNLTVLEN VMAGTESLWH LRSGTPAARR
KLNGICQRFG LTVEPDARVG DLSVGEQQRV EILKALYNDA RILVLDEPTA VLTNLEAERL
FATLKEMARE GLSLIFISHK LDEVMAAADR IVVLRGGRKV AERLAEKTNK AELAELMVGR
KLSRPVREPS TPGEEVLKAA GVSVIIDGVE RLKSVDFSLR AGEVLGIIGV SGNGQTTLAH
LLSGTVGRDR GELLLFGQPV GDLTVDEAVG AGIGRIPEDR NEEGAIGEMA IWENAVLERL
PRFSRHGLVD RQAAQAFAGE IIDAFDVRGG RPPTRTRLLS GGNMQKLILG RNLIDRPRIL
IAAQPARGLD EGAVVAVHAR LLEARRAGTA VLLISEDLEE VMALADRIQA IVNGRLSLPI
AAESADATKL GLMMAGEWND EHEVPHAL
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