| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5334 |
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| Symbol | |
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| ID | 5319636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 295267 |
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| End bp | 296211 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640777107 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001314039 |
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| Protein GI | 150377444 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1079] Uncharacterized ABC-type transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.580591 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTCG TCTTTGACAT TCTCGCTTCC GCGGGCCTCT GGGCGGCTGT TTTGCGCATC
GCCACTCCGC TGATCCTCGG CACGCTCGGG GCGCTGCTCT GCGAGCGCTC GGGGGTGCTC
AACCTCGGCA TCGAAGGCAT CATGACCTTC GGCGCGATGA TCGGCTGGCT CGCGGTCTAT
AACGGCGCCG ACCTGTGGAC GGGTCTCCTC GTCGCAGCCC TTTCCGGTGG GGTCTTCGGC
CTCCTGCATG CGGGTCTGAC CGTGACGCTC GGGCTCTCCC AGCATGTTTC CGGCCTCGGC
GTGACGCTAT TTGCGTCGAG CTTCAGCTAC TACGTCTTCC GTCTGCTCGT GCCGGTGGCG
GGTACACCGC CGACGATCGA GCCATTCCAG CCGATCGACG TGCCGATGCT GTCCTCCCTC
CCCTTCGTCG GTCCGGCGCT CTTCACACAG ACGCCGCCGA CCTATGCGGC TATCTTTCTT
GCATTGGCGC TCGCCTACGT GATTTTCCGC ACGCCGCTCG GGCTCGCCAT CCGCATGACC
GGGGAGAATC CCCACGCTGC CGAGGCGCAG GGGATCAATC CAATGGCGGT GCGCTATGGC
GCCGTCGTCG CCGGCAGCGC ATTGATGGGT GTCGGCGGCG CCTTCCTGAC GCTCTCGGCC
TTCAACAGCT TCTTCCCGAC CATGGTGCAG GGGCGCGGCT GGATCTGCAT CGCGCTCGTC
GTCTTCGCCT CCTGGCGGCC GGGCCGCGCC TTGCTGGGTG CGCTGCTCTT CGCCTTGTTC
GATAGTTTCC AGCTGCGCCT GCAGACGCGG CTGAGCGGCG TGGTACCCTA TCAGATCTTT
CTGATGATCC CCTATCTGCT GTCGATCGCA GCGCTGGCGC TCATGGCCCG ACGCGCCCGC
GTGCCGCAGG CCCTGATGCA ACCGTACCGG CGCGGCGAGC GCTGA
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| Protein sequence | MSVVFDILAS AGLWAAVLRI ATPLILGTLG ALLCERSGVL NLGIEGIMTF GAMIGWLAVY
NGADLWTGLL VAALSGGVFG LLHAGLTVTL GLSQHVSGLG VTLFASSFSY YVFRLLVPVA
GTPPTIEPFQ PIDVPMLSSL PFVGPALFTQ TPPTYAAIFL ALALAYVIFR TPLGLAIRMT
GENPHAAEAQ GINPMAVRYG AVVAGSALMG VGGAFLTLSA FNSFFPTMVQ GRGWICIALV
VFASWRPGRA LLGALLFALF DSFQLRLQTR LSGVVPYQIF LMIPYLLSIA ALALMARRAR
VPQALMQPYR RGER
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