| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5332 |
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| Symbol | |
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| ID | 5319634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 292690 |
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| End bp | 293871 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640777105 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001314037 |
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| Protein GI | 150377442 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.556547 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGTGA ATGCTTCGCC AGCCCTCATG TTCCTGCTGA TCTCGTTCGG AACCATCCTC
GGAATCGCGG GGACTGATTT GATTCTGCCT GCAATCCCCG CCATGCCGGC CGCACTCGGC
GGGACTGCGG CATTGGCGCA GATGGTGCTC GCAGCCTATG CCGCAGGGAC GCTCGTGGGA
TTGCTGACCT TCGGCGAACT CGGGGCGAGA TACTCTCGCC GCACGCTGTT GGTCTGGTCG
CTAAGTCTGT TTGCCGTCAC CTCTCTTCTG TCTGCCTATG CGCCGACGTT GGAATGGCTG
GTCATCCTGC GTTTCGCGCA AGGCGCCTTC GGCTCGGCCC CGGCGGTTTT CGCGCCCGGC
TTTATTCACG GGCTTTTTCC CGGCGACAAG GCACCTTCCA TGTTCGGCCG GCTCGGTTCC
ATAGAGTCCC TGACGCCGGC TCTTGCCCCC ATCGCCGGAG CCTATCTTAT GACCGTTGCG
GGATGGCAGA CCTCCTTCAT TATGCTGGCG GGATTTGCGG TTCTTTGCGC CGCCGGCAGT
TGGGCTTACC GTCAGTCGCT TCCGGACCGG GCCGAGGCTC GTGATATACA TCAGAGCTAT
GGGTCGATCC TTCGCAATGG CGATTTTCTT CGGCACGGTT TAAGTCAGGC GCTTTCCCTC
GGCAGCATTC TCACCTTTGT CTTCGGGGCC CCCGCCGTGA TGACAGGGGC GTTGGGCATG
ACGATCGGAA GCTTCATTCT CCTCCAGGTC TGCGGCATTG CCTTTTTCAT TCTGGCATCG
AACGCGTCCA ATGCACTTGC CCGAAGATTC GGTACCGAAC GCATGATCAT GGTTGGTACA
GGAGGCCTGG TTCTCGGCTT CTTGCTGATT CTTCACTACA CATCTCTTGG CGGACGCAGT
CTGGCCGTGC TCGTGCCCCT GTGGATGACC GCAAACGGCG CGTTCGGCAT CCGGGGGCCG
ATAGGTTTCC ACCAGGCGAT CGTAGCCTCC AGGGGCGATC ATTCACGCGG CGCCGCATTG
GTCGTTGCCG CTATACTCGG GATCACTGCC GGAGGTACGG CCGCCGCGGC GCCTTTCATC
AACATAGGCT GGTGGCCGCT TGCCCTTGCC AGCAGCCTCG CTGCGATATT GGCTTTGCTA
TGTCTGACGC TGATCGGCAG CACGGCGAAA GAGGATGGTT AG
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| Protein sequence | MIVNASPALM FLLISFGTIL GIAGTDLILP AIPAMPAALG GTAALAQMVL AAYAAGTLVG
LLTFGELGAR YSRRTLLVWS LSLFAVTSLL SAYAPTLEWL VILRFAQGAF GSAPAVFAPG
FIHGLFPGDK APSMFGRLGS IESLTPALAP IAGAYLMTVA GWQTSFIMLA GFAVLCAAGS
WAYRQSLPDR AEARDIHQSY GSILRNGDFL RHGLSQALSL GSILTFVFGA PAVMTGALGM
TIGSFILLQV CGIAFFILAS NASNALARRF GTERMIMVGT GGLVLGFLLI LHYTSLGGRS
LAVLVPLWMT ANGAFGIRGP IGFHQAIVAS RGDHSRGAAL VVAAILGITA GGTAAAAPFI
NIGWWPLALA SSLAAILALL CLTLIGSTAK EDG
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