| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5328 |
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| Symbol | |
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| ID | 5319630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 286913 |
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| End bp | 288487 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640777101 |
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| Product | ABC transporter related |
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| Protein accession | YP_001314033 |
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| Protein GI | 150377438 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.862409 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTTCCA TCACCCTCTC CGCACTTTCC TGGGCCAAAC CCGACGGGGA GCATGTTCTT
ACCGATCTGA ACCTCGCCTT CGGCCCGGAG CGGACAGGAT TGGTTGGCAG GAATGGTGTA
GGCAAAACGA GTGTACTCCA CATCGTTGCC GGTCTTTTGA GGCCTGACGC CGGCACTGTT
GCCATCGAAG GACGCGTCGC GCTTGCGAGG CAGATGCTTT CGGCCGGCGC CGACGAAACC
ATCGCCGATG TCTTCGGTGC GACGGAAGCG CTTGCTGTGT TGCAGCGGGC GCAAAAAGGC
GAGGCGCGCC TTGAAGAGCT CGAGAATGCG GATTGGACGG TGGAGGAGCG GATCATGTCA
GCCCTTGCCC GGCTTGGACT GGACGCGCGG GCAGACACGC CTTTGATGCA GCTTTCCGGT
GGCCAGCGCA CGCGTGCGGC ACTGGCCGCG GCGATTTACG CCGAGCCGGA TTTTCTCCTT
CTCGACGAGC CTACGAACAA CCTGGATCGT GACGGCAGAC GATCAGTCAT CGATCTTCTT
TCCGGCTGGC GGAGTGGGGC AATTGTCGTC AGCCACGATC GGGAGCTGCT CGAAGAAATG
GATGCGATCG TCGAGCTGAC TTCGCTCGGG GCGAAACGCT ACGGCGGGGG CTGGAGTGCT
TTTCAGGAGG CGAGGGCAGT CGAGCTGGAA GCGGCGCGGC AAAGCCTGGC GCATGCACAG
AAGACCGCCG ACGAAGTTGA TCGCAAGGCA CAGGCTCTGG CGGAGCGGCA GGATAAGCGT
GATGCGGCGG GTGCCCGAAA AGCGGCAAAA GGCGGGATGC CGCGCATTCT GCTGGGCCGG
CGCAAGAGCA GTGCGGAGGC GAGCCGGGGC AAGGGTGTGG AAGTGACCGA GCGCCAGCGC
GCCGGCGCGC TCGACGCCGT CACGGCGGCC AAAGCCCGGA TCGAGGTGCT GCAGCCCTTT
TCCGTCCGCT TGCCGCCGAC CCGGCTTGCG GCCGGGCGAC AGGTCCTGAC ATTTGACGGC
GTGACCGTCG GTTACGATCC CGCGCGTCCC CTTATCCGGG ACCTGTCCTT CTCCCTGGCC
GGCCCGCAGC GTCTTGCCGT AACCGGCAGC AATGGGTCGG GAAAGACGAG CATTCTGAAG
GTGATCATCG GAGAATTGCC GCCAATCAGG GGTGCCGCTT CCGTGAATGT TCCTTTCGCT
CTGTTGGACC AGAGCGTCAG CATCCTTGAG CGCGGCGAGA CGATCCTTGA TAATTTCAAA
CGGCTCAATC CCGGCGCAAG CGATAACGCC TGCCGGGCGA CATTGGCCAG TTTTCGCTTC
CGCGCGGATG CGGCCTTGCA AAGGGTTGAG ACATTGAGCG GCGGGCAGGT ACTTCGCGCC
GGTCTTGCCT GCATGCTCGG CGGTTCCGAT CCCCCGTCGC TGCTTGTCCT CGACGAGCCG
ACCAATCATC TGGATATCGA ATCCATCGAG GCGGTGGAGG CCGGCCTGCT CGCCTATGAC
GGCGCACTCG TCGTCGTCAG CCACGACGAG ACATTCCTTG CCAATATCGG CATCGACACG
CGGTTGGAGC TTTGA
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| Protein sequence | MPSITLSALS WAKPDGEHVL TDLNLAFGPE RTGLVGRNGV GKTSVLHIVA GLLRPDAGTV
AIEGRVALAR QMLSAGADET IADVFGATEA LAVLQRAQKG EARLEELENA DWTVEERIMS
ALARLGLDAR ADTPLMQLSG GQRTRAALAA AIYAEPDFLL LDEPTNNLDR DGRRSVIDLL
SGWRSGAIVV SHDRELLEEM DAIVELTSLG AKRYGGGWSA FQEARAVELE AARQSLAHAQ
KTADEVDRKA QALAERQDKR DAAGARKAAK GGMPRILLGR RKSSAEASRG KGVEVTERQR
AGALDAVTAA KARIEVLQPF SVRLPPTRLA AGRQVLTFDG VTVGYDPARP LIRDLSFSLA
GPQRLAVTGS NGSGKTSILK VIIGELPPIR GAASVNVPFA LLDQSVSILE RGETILDNFK
RLNPGASDNA CRATLASFRF RADAALQRVE TLSGGQVLRA GLACMLGGSD PPSLLVLDEP
TNHLDIESIE AVEAGLLAYD GALVVVSHDE TFLANIGIDT RLEL
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