| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5320 |
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| Symbol | |
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| ID | 5319622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 277907 |
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| End bp | 278923 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640777094 |
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| Product | putative ABC transporter |
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| Protein accession | YP_001314026 |
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| Protein GI | 150377431 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.493735 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAATTC GTAAGATGCT TCTGGCGTCT GTCGCCGTCG CATGTGCCGC AATGCCAGTC
TCGGCACTTG CCGACACATC CGGCAAGAAG ATCGCCCTTT CCAACAACTA TGCCGGCAAC
TCCTGGCGGC AGGCCATGTT GACAAGCTGG GACAAGGTGA CGGGCGAGGC GGTCAAGGCC
GGTGTCGTCG CCGCCGCGGA CGCCTTCACC ACAGCCGAGA ACCAGGCAAC CGAGCAGGCA
GCCCAGATTC AGAACATGAT TCTGCAGGGC TATGACGCCA TCGTTCTCAA TGCCGCTTCT
CCGACAGCCC TGAACGGTGC TGTAAAAGAG GCGTGCGATG CGGGGATTAC GGTCGTCTCG
TTCGACGGCA TCGTCACCGA GCCCTGCGCC TGGCGCATCG CCGTCGATTT CAAGGAGATG
GGCCGCAGCC AGGTCGAATA TCTTTCGAAG AAGCTGCCTC AGGGTGGAAA CCTGCTGGAG
ATCCGCGGCC TTGCCGGCGT CTTTGTCGAT GACGAAATCT CGGCCGGCAT CCACGAGGGC
GTCAAGCAGT TCCCGCAGTT CAAGATTGCC GGATCGGTCC ATGGCGACTG GGCGCAGGAC
GTTGCCCAGA AGGCCGTCGC CGGCATTCTG CCGAGCCTGC CGGAAATAGC CGGCGTCGTC
ACGCAGGGCG GCGACGGGTA CGGTGCGGCA CAGGCAATCG CGGCAGCAAA GCGGCCAATG
CCTATCATCG TCATGGGAAA CCGCGAAGAT GAGCTGAAAT GGTGGCAGCA GCAGAAGGAA
GCCAATGGCT ATGAGACGAT GTCGGTCTCC ATTGCCCCCG GCGTGTCGAC GCTGGCCTTC
TGGGTCGCCC AGCAGATACT GGACGGCAAG GAAGTGAAAA AAGATCTGGT GGTGCCGTTC
CTCCGCATCG ATCAGGACAA TCTCGAGCAG AACCTCGCCA ATACCCAGGC CGGCGGTGTC
GCGAACGTTG AATATGCGCA GGAAGACGCG ATCAAGGTCA TCGAAGCGGC CAAGTAA
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| Protein sequence | MTIRKMLLAS VAVACAAMPV SALADTSGKK IALSNNYAGN SWRQAMLTSW DKVTGEAVKA
GVVAAADAFT TAENQATEQA AQIQNMILQG YDAIVLNAAS PTALNGAVKE ACDAGITVVS
FDGIVTEPCA WRIAVDFKEM GRSQVEYLSK KLPQGGNLLE IRGLAGVFVD DEISAGIHEG
VKQFPQFKIA GSVHGDWAQD VAQKAVAGIL PSLPEIAGVV TQGGDGYGAA QAIAAAKRPM
PIIVMGNRED ELKWWQQQKE ANGYETMSVS IAPGVSTLAF WVAQQILDGK EVKKDLVVPF
LRIDQDNLEQ NLANTQAGGV ANVEYAQEDA IKVIEAAK
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