| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5255 |
|---|
| Symbol | |
|---|
| ID | 5319557 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009621 |
|---|
| Strand | - |
|---|
| Start bp | 215981 |
|---|
| End bp | 216571 |
|---|
| Gene Length | 591 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640777032 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001313964 |
|---|
| Protein GI | 150377369 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2135] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.601003 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGCAATG ATTATCGGCT GATGGTGGAT GTCGCCTCGA TCATCGAGGA GTTCGCCGAG
CTTAAGATCA AGATCCGTTT CGGCGAAGGC ACGCCGAACC TCGAAGCTCG TGAGGACATC
AAGATCACCG ACGTCGGCCC CATCGTCAGA ACGCTCGCCG GCGCGCGCGA TGAGGCTGAA
CTTGTGCAGC GGCGATGGAG CTGGCCGGGA CCGAACAAGC GGCCGGTCTA TAATTTCCGG
TCGGAAGGAC GGGCGTTCGA CGCCAACCGC TGCCTGATCA TCGCCGATGG CTTCTATGAG
TTCACGCAAC CTAAGGACCC GAAGAAAAAG CGCAAGGACA AGTGGCTCTT CACCAAGAAG
GGAGAACGCA TCTTCTGCAT CGCCGGTATC TGGCGCGAGA CTCCGGATGT CGGCCAGGCT
TTCACGATGC TCACCATGGA GCCGGGGCCC GACATCGCAC CATATCACGA CCGGCAGATC
GTCATCCTGG ACCGCAGCCT GTGGGCGAGC TGGCTCGACC CGGCCATTTC TGCGACGTCA
CTGATCAGGC CCCTCTCAGC GGGAACTCTT GCAGTCGAAC AAGTAGGCTG A
|
|---|
| Protein sequence | MCNDYRLMVD VASIIEEFAE LKIKIRFGEG TPNLEAREDI KITDVGPIVR TLAGARDEAE
LVQRRWSWPG PNKRPVYNFR SEGRAFDANR CLIIADGFYE FTQPKDPKKK RKDKWLFTKK
GERIFCIAGI WRETPDVGQA FTMLTMEPGP DIAPYHDRQI VILDRSLWAS WLDPAISATS
LIRPLSAGTL AVEQVG
|
|---|
| |