| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5248 |
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| Symbol | |
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| ID | 5319550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 211462 |
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| End bp | 212523 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640777025 |
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| Product | endonuclease/exonuclease/phosphatase |
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| Protein accession | YP_001313957 |
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| Protein GI | 150377362 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2374] Predicted extracellular nuclease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.284119 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.61528 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCA AACGTTTGAG CATCGGCACG TTCAATCTCT ACAATCTCAA CGAGCCGGGA
TTGTCCATGT ACACCGACAA GACCGGCTGG TCGCAGGAGG AATATGATCG CAAGATCGAG
TGGACCAGCC GCACGATCCG CCTGTTGCAT CCCGACATCT TCGGATTTCA GGAGTTGTGG
CACTCGGCGT CCATCGAACG CGCGCTCACC CAATCCGGGA TAGCCGGCGA CTACGATCTG
ATCGTCCCGG AGAATGCCGA CGGCAAACGG ATCGTCTGCG CCGCCATCGT GCGCAAGGGG
CTGATGATCA GCGAGCCCCA ATGGCTTAAA CGCTTTCCGG AAAAGTTCAC CCTCAAGAGT
TCCGGCGACG ATCCTCAGAC GCCGGCGATC ACCGTTTCCA TCCCGAGCTT CTCGCGCCCG
GTGCTGCATT TTTCGGTACG GCCGCGCGAG GATCACGAAC CCATCCACGT CTATGTCTGC
CATTTCAAAT CGAAAGGACC AACCAAGGTC TTTCAGGAAG ACTGGTTCGA GGCCGATGGG
GCGCTCTACA AAAAGCACGC GACCAGCATC GGTGCGGCGA TCTCGACGAT CCGACGAACG
GCCGAGGCCG CGGCGTTACG GTTCATTCTG ACCGAGCAGA TGAAAGGGAC CCGCACTCCG
GTCATAGTAC TTGGCGACAT CAATGATGGC CAGCACAGCA ACACCGCCAA CATCCTGACC
GAGCAGCCGC GCTATCTGGT CGGCGATTCT CTTGGCGGCG GCGATGTCAG CCTCTACACC
GCTCAGACCC TGCAGGAATA CCGCAGCACG CGAGATGTCT ACTACACACA TGTCCATCAG
GACATCATGG AGTCGCTCGA CCACATTCTG GTCAGCGAGG AATTCTACGA CAACTCACGA
CGACGGGTGT GGATGTTCGA TGGCATGACG GTCAACAATG ACCATCTCAA TTCCGATGAC
CACAAGGAAG CGGGCACCAG CGATCACGGC GTGATCTGCG CCACGTTCAA ATACAGGCCG
ATCAAAGCCG AAGCGCAGGA GATCGCCGAC GGCACGGCGT AA
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| Protein sequence | MKLKRLSIGT FNLYNLNEPG LSMYTDKTGW SQEEYDRKIE WTSRTIRLLH PDIFGFQELW
HSASIERALT QSGIAGDYDL IVPENADGKR IVCAAIVRKG LMISEPQWLK RFPEKFTLKS
SGDDPQTPAI TVSIPSFSRP VLHFSVRPRE DHEPIHVYVC HFKSKGPTKV FQEDWFEADG
ALYKKHATSI GAAISTIRRT AEAAALRFIL TEQMKGTRTP VIVLGDINDG QHSNTANILT
EQPRYLVGDS LGGGDVSLYT AQTLQEYRST RDVYYTHVHQ DIMESLDHIL VSEEFYDNSR
RRVWMFDGMT VNNDHLNSDD HKEAGTSDHG VICATFKYRP IKAEAQEIAD GTA
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