Gene Smed_5207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5207 
Symbol 
ID5319509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp166863 
End bp167798 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content62% 
IMG OID640776985 
Producthypothetical protein 
Protein accessionYP_001313917 
Protein GI150377322 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAGC GGTTACTGAG TCGGCGCTTC GGCCCGCCGG TCATTCTTCT ATGTATATTG 
ATCACGGGTT GTACCGCCCG AGAAGGCGTG CGCATGCCAA CGGCAGCGGC AATGGTGCCG
GCCGAAAATG CTCTCGTGCT CCCGCCACCG GGCGGCCCGT CAGTACTAAG TGTCGTCGAG
CGGCGTACCT CGAACGCGGT GGAGCAGGAC ATCTATCTTT ACACATCCGC TGCCACGCCG
GGTCAGAACT TCTTGCGCGT GCAGTTTTTT GGACCTGTAG GTACGAGCAG TGCGCAGGAG
CGAACCGCTT ACATTCCGAT CCGCAGTTCG GAGATGCTGC GGGAGGCTTA TCGCGCAATA
CCGGGCGCCG CCCTGAGGCA GACCGCCGAC TATCTGCAAA ACAACTACGG TCCGTTCAGC
TACGCCTTCG GCCGCGGCCG GGGCAACGAT TCCTGTCTTT ACGCCTGGCA GCAAATCCGG
CCACCTCAGC ACCGCCGCTC GCCATTGCGG GACTATGGCA CCATTCAGAT CCGCCTTCGC
TATTGCAAGA CTGGTGCTAC GGAAAGCGAA CTACTGGCGG CTGTTTATGG TTATACGATC
CTTGGCACTT TCGCTGATCC GGACTGGAAT CCCTATGGCG AGCCTCCGGC AGTGGATCCG
GCTTTGGGCC GGGCAGGCAA CCCGATCTAT TGGCATGAGC GGCCGCTCGC TGCGGCGGGA
GCGCCCATTC AGCCGGTCAG GTTGGTGCGG TCGGCTCCCG AGCTTACGAG TGCGATCAGG
CCGGAGTTGC AACAGGAGAC GGCGGCCCCT ACCGAGACCG TGGTTCCTAC ACCCACCGGT
TCGCCTCAAA TGAATCCGCC GGTTCCGTCC GGCAATAGCA CGATTGTCGT TCCCACGCCG
GCTTGTGGAG CGCAGCCGGC AAGTGAATGC CCTTGA
 
Protein sequence
MAKRLLSRRF GPPVILLCIL ITGCTAREGV RMPTAAAMVP AENALVLPPP GGPSVLSVVE 
RRTSNAVEQD IYLYTSAATP GQNFLRVQFF GPVGTSSAQE RTAYIPIRSS EMLREAYRAI
PGAALRQTAD YLQNNYGPFS YAFGRGRGND SCLYAWQQIR PPQHRRSPLR DYGTIQIRLR
YCKTGATESE LLAAVYGYTI LGTFADPDWN PYGEPPAVDP ALGRAGNPIY WHERPLAAAG
APIQPVRLVR SAPELTSAIR PELQQETAAP TETVVPTPTG SPQMNPPVPS GNSTIVVPTP
ACGAQPASEC P