Gene Smed_5185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5185 
Symbol 
ID5319487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp139784 
End bp140053 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content57% 
IMG OID640776963 
Producthypothetical protein 
Protein accessionYP_001313895 
Protein GI150377300 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.437019 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGGGG AACCGGACTG GAAACACTGC ATGGCAGCAG CATTGCGGCG ATTTCCGGCG 
CGCTCCTTGC AAATCAGGGA GCTATCGATG CGCGATGAGG ATTTCAGGGG AATGTGCGAG
GATTTTGCAG CCGCTGAGGA CGCACTCGCG GCCGTCGATC AGCTTCCTTT GCATATTCGC
GAGGAACGCC GTGCTGAGTT CAAGGGACTG ATGGAGAGCT TGGCAGCAGA GATTGATGAA
GCGCTTGGCC CGGCGGACGG GTTCATTTGA
 
Protein sequence
MNGEPDWKHC MAAALRRFPA RSLQIRELSM RDEDFRGMCE DFAAAEDALA AVDQLPLHIR 
EERRAEFKGL MESLAAEIDE ALGPADGFI