Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_5124 |
Symbol | |
ID | 5319426 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | - |
Start bp | 78055 |
End bp | 78480 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640776902 |
Product | TadE family protein |
Protein accession | YP_001313834 |
Protein GI | 150377239 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4961] Flp pilus assembly protein TadG |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0349202 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGCAT CGGGCGGCAG AATTCGCAGC CTGCGGCGCA ATCAATCCGG CGCAACGGCG GTGGAGTTTG CGCTCGTGTG CCTGCCTTTG CTGCTGCTCG TCATCGGCGT CATCGAGTTC GGCCGCGCCT TTTATGTGCG CAATGAGCTG TCGCACGCCG CCGACGTCGC CGCCCGGCGC GTGCTTATCG GCCAGATCGC ACACAACGCC TCCGACAGCG AAGCACAGGC CAAGCTGGAC AGCGCAGTGC GCGAGAGCTT TCGCAGCGGC GATCCGACGC TGCTCACGAT CGCCGTCAGC AAGGAAACGG TGGACGGAAT AGCTTTCCGG GTGCTGTCGA TCCGTTACCC GTTCACCTTT GTCCTCCCCG GTCTCGCCCA GAGCAGGATC AGCCTCAATC TGTCTCGGCG CATCCCGATC GGGTGA
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Protein sequence | MTASGGRIRS LRRNQSGATA VEFALVCLPL LLLVIGVIEF GRAFYVRNEL SHAADVAARR VLIGQIAHNA SDSEAQAKLD SAVRESFRSG DPTLLTIAVS KETVDGIAFR VLSIRYPFTF VLPGLAQSRI SLNLSRRIPI G
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