| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5117 |
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| Symbol | |
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| ID | 5319419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 69044 |
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| End bp | 70681 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640776895 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001313827 |
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| Protein GI | 150377232 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0275586 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCGAT TGGCGAATAG CGTATATGGT ACTTTGGGGC TGGCAATGGT CCTGTTCGTG
GCCGCATCGG CGCTGCTCGT CGGGTCCAGC TTCATTGCTC TGGAACGCCT GCGGTCCGAT
CTTGCGGCGA CATCGTCGCT GGGCAAGGAG CGACTCGCCT ATCGGATGAT CTACGCTGCC
AGTCACCTGG AGCGAGCGCA AGGACCTGCA AGGGGGGCCG CTGCCGATGA GCTGCGCCAA
TTGATGGACC AGAACGAGCG GTTTCTCGAG CGGTTGGGAA GTGACCGCGA GAGGATCGGG
CTGGCGACAA CGAGCGATCC CGCTGCTTTC GCGCAGCTTG AACGAGTCCG GGAACAATGG
CGGGATGATG TCAGGCCAGC TCTTGAGAGC GCCATCGCCG AAGTTCCGCT CACTCACGCA
GCACTGGATG CGCTCGATCC CAAGGTCAGA GTCTTCGCGG AGCAGCTGGA AGATTTGATC
AATCCGATCG AACAGGCAGG AATCGCCCGA CTCAAGCGGT CCCAGTTGCT GCAACTCGGT
TTCTCGATCC TTTCCCTCCT GCTGCTCATC CACATATTGC GGGTTGTGCG CCGTCTTGCA
CGCCGCACGC GTGCACTCGC CGGCCTCGCG GAAAGGGTCA GCACCGGTGA CTTAGGACAG
AAAGCTGCCG TCGAGGGTAC CGACGAGCTC GCGGTGCTCG GCGCTTCCTT CAATGCGATG
ACCACAAGGC TTGCCGCGAT GATCGACAGC GAGCGGGGCA GCAGGGAAAG ATTGGAAGCG
TTGCTCGCCA CTATCTCGGA AACGGCACAA CACCTCTCAT CATCCGCTGC CGAGATTCTC
GCCGGCGCCA CGCAACAGGT CGAAGGGATG CGCGAACAGT CCTCGGCAGT TGCTCAAACG
GTCACGAGCG TTGATGAGGT ACTGCAAACC TCAGAACAGG CGGCGCAGCG CGCGCAGCAG
GTTGCCGCCT CCTATGACAA CGCCGTCAAG ATCAGCAATG AGGGCCGCAG AGCACTCGAC
GACACGGTGC GGGTGATGAA TGCGGTGAAC GCGCGGACGG AAGCGATCGC TGCAGATATT
CTGTCACTTG CGGAGAACAG CCTCGAGATC GGCGAGATCG TCTCGGTCGT CGCCGAGATC
GCGGACCAGA CCAACCTGCT GGCACTGAAT GCAGCAATCG AAGCATCGCG TGCCGGCGAG
CACGGCAGGG GTTTCAATGT CGTCGCTACG GAAATCCGTA CACTTGCCGA TCAGTCGAAA
TCCGCGACCG CCAGGGTCCG ACGCATCCTG ATGGAAATTC AGAAATCCAC GAACTCCGCG
GTCATTGGCG CGGAGGACGG GTCCAAGAGC GTCAGCCGTG CGCTCGAAAC GGTCAGTGAA
GCGGGCGAAA CCATCCGGCA ACTCGAGGCG ATCGTCGCCG ACTCTGCGCG ATCGGTGGCT
CAAATCGCCG CCTCGGCCGG TCAGCAACGC GCCGGCATGA AGCAGATTCA CGAGGCAATG
CATTATATCG AACAGACCAG CAGCCAGAAT CTATCGGCGA TACGGCAGGC CGAGGAAGCC
GCGAAGGATC TGAATGAGCT CGGCTCGAGG CTGAAGGAAA TGCTCACCGA CCACGGTAAC
GACCATGATA ACACCTGA
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| Protein sequence | MPRLANSVYG TLGLAMVLFV AASALLVGSS FIALERLRSD LAATSSLGKE RLAYRMIYAA
SHLERAQGPA RGAAADELRQ LMDQNERFLE RLGSDRERIG LATTSDPAAF AQLERVREQW
RDDVRPALES AIAEVPLTHA ALDALDPKVR VFAEQLEDLI NPIEQAGIAR LKRSQLLQLG
FSILSLLLLI HILRVVRRLA RRTRALAGLA ERVSTGDLGQ KAAVEGTDEL AVLGASFNAM
TTRLAAMIDS ERGSRERLEA LLATISETAQ HLSSSAAEIL AGATQQVEGM REQSSAVAQT
VTSVDEVLQT SEQAAQRAQQ VAASYDNAVK ISNEGRRALD DTVRVMNAVN ARTEAIAADI
LSLAENSLEI GEIVSVVAEI ADQTNLLALN AAIEASRAGE HGRGFNVVAT EIRTLADQSK
SATARVRRIL MEIQKSTNSA VIGAEDGSKS VSRALETVSE AGETIRQLEA IVADSARSVA
QIAASAGQQR AGMKQIHEAM HYIEQTSSQN LSAIRQAEEA AKDLNELGSR LKEMLTDHGN
DHDNT
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