| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5103 |
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| Symbol | |
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| ID | 5319405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 50652 |
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| End bp | 51542 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640776881 |
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| Product | substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_001313813 |
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| Protein GI | 150377218 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.257354 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTTCG CACCGAAACT TGCCAAGACC CTTCTATCGG CGGCGGCGAT CGCGTTCATC
ACGACGACCG CCTGGGCCGC CACGCTTACC GTAGGCGGGA AGAACTTCAC CGAGCAGCTG
ATCATCGCAG AGATCACGAA GCAGCTCCTC GAGAGCAAGG GCCACACCGT CGACAAGAAG
GACGGCATGG GCACCAAGAT CGTTCGCGCC GCACTGGAGA ACGGCGAGGT CGATCTCTAC
TGGGAGTATA CGGGGACGTC GCTCATCACC TTCAACAAGG TGATGGAACG GCTTTCGCCG
GAGGAGACCT ATAGCCGCGT CAAGGAACTT GACGGCGAAA AAGGACTTGT CTGGCTGGCA
CCGTCCGCGG CCAACAACAC CTACGCCTAT GTCATCAAGC CTGATAATGC CAAGACGGAG
GGCATGGAGA CGATTTCGGA TCTCGCCAAG GCATATAATG ACGGCAAGAA AATCCTCATG
GGCACTACGG CCGAATTTCC GAAGCGCCCG GACGGCCTGA TCGGCCTGGA AAAGGTCTAC
GGTTTCGAGA CCGGGCGCGC CAATGTGCGC CCGATGGATC TTGGTCTCGC CTATAACGCG
CTGGCCAATG GCGACCTCGA CACGATCGCC GCGCAGGCGA CCGACGGCCA GATCGCTGCA
CTCGGCCTGA AGGTGCTGAA GGACGACAAG GGCTTCTTCC CCAACTATGC GCTCACCCCG
GTCGTCCGCA AGGAAGTGCT CGACGCGAAT CCCGATCTCA AGGAGACGCT GGAAGCAGTC
TCGATGAAGC TCGATGACGC GACCATGCAG CGTTTGAACA GCGAGGTCGA TGTGGAGAAG
AAGACCATCG AGGCCGTGGC CGCCGACTAC CTGAAATCGC TGGGCATGTA A
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| Protein sequence | MNFAPKLAKT LLSAAAIAFI TTTAWAATLT VGGKNFTEQL IIAEITKQLL ESKGHTVDKK
DGMGTKIVRA ALENGEVDLY WEYTGTSLIT FNKVMERLSP EETYSRVKEL DGEKGLVWLA
PSAANNTYAY VIKPDNAKTE GMETISDLAK AYNDGKKILM GTTAEFPKRP DGLIGLEKVY
GFETGRANVR PMDLGLAYNA LANGDLDTIA AQATDGQIAA LGLKVLKDDK GFFPNYALTP
VVRKEVLDAN PDLKETLEAV SMKLDDATMQ RLNSEVDVEK KTIEAVAADY LKSLGM
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