| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5093 |
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| Symbol | |
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| ID | 5319395 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 41894 |
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| End bp | 42577 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640776872 |
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| Product | 3-oxoacid CoA-transferase, B subunit |
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| Protein accession | YP_001313804 |
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| Protein GI | 150377209 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
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| TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.137227 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGCCG AAACTCAATT GAAGCTTTCC AACGCGCAGA TCGCATGGCG CGCGGCGCAG
GACATCGAAG ACGGTGCCTA CGTGAATCTG GGTATCGGTT TCCCGGAAAT GGTGGCGCGC
TACCAGCCGC CTGGCCGCCA AGCGGTATTC CATACCGAAA ACGGCATCTT GGACTTCGGT
GAGGCACCAC CCGAGGGGCA TGAAGACTGG GATCTGATCA ACGCCGGAAA GCGGCCCGTC
ACGCTCAAGC ACGGCTCGTC CTTTTTCCAT CACGCTGACA GCTTTGCCAT GGTCCGCGGG
GGGCATTTGG ATGTGGCCAT CCTTGGAGCA TACCAGGTCG CCGAGAATGG TGATCTTGCC
AACTGGCGCG TCGGGTCGCG TGCCGTTCCG GCTGTTGGAG GCGCGATGGA CCTCGTCCAT
GGAGCCAAGC AGGTGTTCGT GATAACCGAA CACGTCACAA AGGATGGTGA ACCCAAGCTT
GTTGAGTTCT GCACATTCCC GCTTACCGGT GTCGGCTGCA TCACCCGCGT CTACACCAGC
CACGCGGTCG TGGATATCAA GAATGGCCGA TTCGTGTTGA AGGAGAAGCT TCCCGGCCTT
CCCCTCGAAG CCCTGCAGAA GATGACGGGC GCGAAACTTC ACGTCGACGG CTCCGTGGCC
GATCTGATCG TGCCAGCCGT TTAA
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| Protein sequence | MSAETQLKLS NAQIAWRAAQ DIEDGAYVNL GIGFPEMVAR YQPPGRQAVF HTENGILDFG
EAPPEGHEDW DLINAGKRPV TLKHGSSFFH HADSFAMVRG GHLDVAILGA YQVAENGDLA
NWRVGSRAVP AVGGAMDLVH GAKQVFVITE HVTKDGEPKL VEFCTFPLTG VGCITRVYTS
HAVVDIKNGR FVLKEKLPGL PLEALQKMTG AKLHVDGSVA DLIVPAV
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