| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5080 |
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| Symbol | |
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| ID | 5319382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 27372 |
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| End bp | 28880 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640776860 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001313792 |
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| Protein GI | 150377197 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0526207 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAAACA AATCTGTTCG CGTGATTGCG GGCGCCATGG TGGTCGCCGG ATGGGCCGGC
TATGCCGCGG CGCAGAATGC CTCGGAAATC AAGATCGTCC TGCCGGAACA GCCGGCCAAT
CTCGAGCCCT GCGGTACCAT CATCACCAAT GTCGGCCAGA TACTGAGCCG CAACGTGGTC
GAGCCGCTGA CGATCATCGA TCCGAAAAGC GGCCAGCCAA CATCCGGTCT TGCGACCGAG
TGGAAGCAAA CGGATCCGAA CACGTGGCAG CTCAAGCTGC GCGAAGGCGT CAAATTCCAG
GATGGTGCCG CCTTCAATGC AGAGGCGGTC AAATTCTCGA TCGAGCGCAT GACCGGCGGC
AAGCTGACCT GCAGCAACAT TGCCAAATTC GGCAATGCCA AGCTCACCGT CACGCCGATC
GACGACCTCA CGGTCGAGAT CAAATCGGAT ACGCCGCAGC CTATTTTGCC GACGCTGCTC
AGCGTGGTCA TGATCGTCTC GCCGAACACC CCGGCGGACA AGGCCGTGAA CGATCCGGTC
GGAACCGGTC CTTTCAAGCT CTCGAGCTTT ACGCCACAGA CTGTCGTGTT GGAAGCCTTT
GACGGCTACT GGGGCGAGAA GCCGGCCATT GCCAGGGCGA GCTATGTCTG GCGCCCGGAA
TCCTCGATCC GTGCCGCCAT GGTGGAGACC GGCGAGGCCG ATCTGACGCC GTCCATCGCC
ATCCAGGATG CCACCAACCC GGAAACGGAC TTCGCCTATC TGAACTCGGA GACGACAGCG
ATCCGCATCG ATGCCGGGTT CGCTCCGCTC GACGACGTGC GGATTCGCAA GGCGCTGAAC
CTTGCGATCG ACTGGAATGG TCTTGCGCAG CTTTTCGGCG AGGACGTGCA GCGTGCTTCG
CAGATGGTTG TCACCGGCAT CAACGGTCAT GACGACAAGC TGGCGCCCTG GGCCTTCGAT
GCCGAAAAGG CCCGTGCGCT GATCGCCGAG GCCAAGGCTG CGGGCGTACC GGTCGATACC
GAAATCGAAC TGATCGGCCG CAACGGAATT TATCCCAACG GTACGGAAGC CATGGAAGCC
ATGATGGCCA TGTGGCAGGA TGTCGGTCTG AATGTGAAGC TGACGATGCT CGACGTGAAC
GATTGGCTCC GCTACCTGCA GAAGCCTTTC CCGGAAAGCC GCGGGCCGAA CCTTTTGCAG
ATGATGCATG ACAACAACAA GGGCGACGCC GCCTTCACCG TTCCGATCTT CTATACGTCG
GGCGGAAGCT ACTCGACCTT CAACGATGCG GCGTTCGACA AGGAGATCGC CGATGCCATG
GCTGCCACCG GCGAGGACCG TACGGCCAAG TTCAAGGCGA TCTTCGCGAA GGTGCATGAG
GAGCTTGCGG TCGATATCCC GATGTTCCAC ATGATCGGCT ACACCCGGGT GGGCAGCCGT
CTGGAGTGGA AGCCGGACAT CACGACCAAC AGCGAGATCC CGCTGGCCAA TATCGGCCTC
AAGGATTAA
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| Protein sequence | MGNKSVRVIA GAMVVAGWAG YAAAQNASEI KIVLPEQPAN LEPCGTIITN VGQILSRNVV
EPLTIIDPKS GQPTSGLATE WKQTDPNTWQ LKLREGVKFQ DGAAFNAEAV KFSIERMTGG
KLTCSNIAKF GNAKLTVTPI DDLTVEIKSD TPQPILPTLL SVVMIVSPNT PADKAVNDPV
GTGPFKLSSF TPQTVVLEAF DGYWGEKPAI ARASYVWRPE SSIRAAMVET GEADLTPSIA
IQDATNPETD FAYLNSETTA IRIDAGFAPL DDVRIRKALN LAIDWNGLAQ LFGEDVQRAS
QMVVTGINGH DDKLAPWAFD AEKARALIAE AKAAGVPVDT EIELIGRNGI YPNGTEAMEA
MMAMWQDVGL NVKLTMLDVN DWLRYLQKPF PESRGPNLLQ MMHDNNKGDA AFTVPIFYTS
GGSYSTFNDA AFDKEIADAM AATGEDRTAK FKAIFAKVHE ELAVDIPMFH MIGYTRVGSR
LEWKPDITTN SEIPLANIGL KD
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