| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5079 |
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| Symbol | |
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| ID | 5319381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 26382 |
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| End bp | 27299 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640776859 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001313791 |
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| Protein GI | 150377196 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.310783 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCTCG GCTATATCGG CCGGCGGGCA TATCACAGCG TAATTTCGGT GATCGGCCTG
CTGACGCTCG TCTTTTTCCT CACGCGCCTG ACCGGCGACC CGTCGGCGCT CTACCTGCCG
CTCGACTCCA GCCTCGAGGC GCGCCAGGCC TTTGCACGCC TCAACGGCCT GGACCAGCCG
ATCTACGTGC AATTCTTCCA GTACCTGCAT AACCTTTTGT CATTGGATTT CGGCCAGTCC
TTGCGGCAGA ACCGGTCGGC GATCGAGGTG GCTCTCGAGG CCTTTCCGGC CACGCTGAAG
CTCGCTGTGG TCGCCATGAC GCTCTCGATC GCTCTTGCGA TCGTCGTCGG CGCGCTGGCC
GCTGCCCGTC CCGGAAGCCT GTTCGACCGC ATAGCCGGAC TCGTTTCCCT GGCGGGTGCG
AGCACGCCCG ATTTCTGGAT CGCGATTGTA GGCATTCTTG TTTTCGCCGT CGGCCTCGGC
GTACTGCCGA CCTCGGGCAC CGGCTCCGGA TTGCACTGGA TCATGCCGAT CTTCGTGCTG
ATGCTGCGCC CTTTCGGGCT GCTGGTACAG GTGGTGCGGG GCACGATGAT TTCGGCGCTC
GCCTCCCCCT TCATCAAGAC GGCCCATGCT AAGGGCATGA AGCGTCGTAA AATCATATTC
GGTCACGCGC TCAGAAACTC GCTGCTGCCC GTCATCACGG TTGCCGGCGA TCTGGCCACC
GGCCTGATCA ACGGCGCTGT CGTCGTCGAA ACGATTTTCG GCTGGCCTGG CATCGGCAAG
CTGATGATCG ATTCCATCAT CCAGCGCGAC TTTGCCGTGG TGCAATCGAC GATCCTCGTC
ACGGCAATCG CCATTTTCAT CGTCAACATC GCGATCGATC TTCTCTACGC AGTGCTCGAT
CCGCGCATCC GCTACTGA
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| Protein sequence | MMLGYIGRRA YHSVISVIGL LTLVFFLTRL TGDPSALYLP LDSSLEARQA FARLNGLDQP
IYVQFFQYLH NLLSLDFGQS LRQNRSAIEV ALEAFPATLK LAVVAMTLSI ALAIVVGALA
AARPGSLFDR IAGLVSLAGA STPDFWIAIV GILVFAVGLG VLPTSGTGSG LHWIMPIFVL
MLRPFGLLVQ VVRGTMISAL ASPFIKTAHA KGMKRRKIIF GHALRNSLLP VITVAGDLAT
GLINGAVVVE TIFGWPGIGK LMIDSIIQRD FAVVQSTILV TAIAIFIVNI AIDLLYAVLD
PRIRY
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