| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5066 |
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| Symbol | |
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| ID | 5319368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 12384 |
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| End bp | 13304 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640776846 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001313778 |
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| Protein GI | 150377183 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGGAAT TCATCGTCCG CCGCCTGTTC CAGGGGATAC TCGTCGTTTT CGGCGTGACA
GCGACTGTTT TCGTCGTGAC ACGGCTGGTG GGCGATCCAG TCGCACTGAT GCTGCCGCTC
AGCGCGACGG AGGCGCAACG GGCTGCCTTT GCCCAGCAGA TCGGCCTGGA TCAGCCGATC
GTCACGCAAT TCTTGCGGTT CGTCGGGGAT ATCGCCACAC TGGACTTCGG AAACAGTCTT
TGGCAGCGGC GCCCTGCTAT AGAGGTCGTA TTCGAGCGCT TGCCGAACAC GCTGCTGCTG
ATCGCGGCAG GGCTCGGCGC GGCGGTCATG CTATCGATCC CTCTTGGCGC CGTATCGGCG
CTGCGGCCAG GCGGATTGGT CGATCGGCTG ACGATGTCGG TCGGACTTCT CGGGCTTGCG
ATGCCGCAAT TTTGGCTTGG CCTCGTCGCC ATCATGATCT TCGCGGTCAC GCTCAAATGG
CTGCCGACCT CCGGCATGGG CACGGCCGCG CATCTTGTTC TGCCTGCCCT GACCCTGTCG
CTGACGCCGC TTGCGCGCTT CACGATGATG GTGCGCGCGT CGATGATCGA TGAGCTCAAC
AAGCCCTACG TCAAGACGGC GCGGGCGAAG GGTCTCGGGC TAACGCGGAT CCTGCGCGTC
CATACCTTGC GCAACATCCT TGTTCCCTTT CTCTCCATTT CCGGATGGGA GCTGATTTCC
ACGCTCTCCG GCTATACCGT CGTGGTCGAG ACGGTGTTCG CATGGCCCGG ACTGGGCCTC
ACGGCTGTGC AGGCTATCCA GCGCGGCGAC CTGTTTCTGA TGCAGGCCAT CGTCTTCGTC
ATAGCGTTCC TGATCGTATT GATCGGCATC GTGCTCGACA TCCTGTCGAA GGCGGTGGAT
CCGAGGATGG AACTGAACTG A
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| Protein sequence | MLEFIVRRLF QGILVVFGVT ATVFVVTRLV GDPVALMLPL SATEAQRAAF AQQIGLDQPI
VTQFLRFVGD IATLDFGNSL WQRRPAIEVV FERLPNTLLL IAAGLGAAVM LSIPLGAVSA
LRPGGLVDRL TMSVGLLGLA MPQFWLGLVA IMIFAVTLKW LPTSGMGTAA HLVLPALTLS
LTPLARFTMM VRASMIDELN KPYVKTARAK GLGLTRILRV HTLRNILVPF LSISGWELIS
TLSGYTVVVE TVFAWPGLGL TAVQAIQRGD LFLMQAIVFV IAFLIVLIGI VLDILSKAVD
PRMELN
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