Gene Smed_5049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5049 
Symbol 
ID5317923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp1570053 
End bp1570421 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content56% 
IMG OID640776829 
Producthypothetical protein 
Protein accessionYP_001313761 
Protein GI150377165 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.55196 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTTGCT CGGGCTCGAC GCGTGCGGCA CCGTATGCGC CGCTCCAAGA ATTGTCGACC 
TCTCATTCAT TCTTGATCCG CTCGCGGCGG AATTTGCTCC AGGTCAATAT TGAAGATGCG
GTCGTGGCTG GACAGGAGCT GCGGTTGTTT CAGCGTGGCA ACAAGCGGCA TATCGACAAT
GCCGTCATTC GTTACCCGCC TTCGGCGGTT TTAAACGGTC AATTCCATGA CGCCGATTGC
GATCGAGCGG TTCGATCTCG GTGCCATCCG ACGTTGGGTG TTGCCGCCTT CGATCCTGGT
CGCCAACGTC TTTCGATGAA GGTGGTCAAG CTAGAGCCGC CTGATTACAC ATCCTCAGCA
TCACTCTGA
 
Protein sequence
MSCSGSTRAA PYAPLQELST SHSFLIRSRR NLLQVNIEDA VVAGQELRLF QRGNKRHIDN 
AVIRYPPSAV LNGQFHDADC DRAVRSRCHP TLGVAAFDPG RQRLSMKVVK LEPPDYTSSA
SL