| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4989 |
|---|
| Symbol | |
|---|
| ID | 5318710 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009620 |
|---|
| Strand | - |
|---|
| Start bp | 1503226 |
|---|
| End bp | 1503696 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640776771 |
|---|
| Product | GCN5-related N-acetyltransferase |
|---|
| Protein accession | YP_001313703 |
|---|
| Protein GI | 150377107 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1247] Sortase and related acyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.662417 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.00545229 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCTACCAA TCCGCCTGCT GCAGCCAGAT GATCCGGCCC TGCCGGCGCT CGCGATCCTG
ATGGAGGAAA TGCAGGCGCA TTACCGGGTG GCTTGTCCGC CTCGCTCCGA GATCATCGCC
GGGCTTAAAG CCATGCCCCG GGGCGCCGAA ATCCTGGTTG CCGAGGAACA GCATCGCATC
CTCGGTTTTG CGGGGTTTTC GGGGATCTAT CCCGGGCCAG GGCTGAAGCC GGGGCTATTT
CTCAAGGAAC TCTATGTCGC CGGATCCCAG CGGGGCCGAG GCCTCGGCCG GGCCCTGATG
CAGAAGCTTG CCAGCGTGGC GACGCAACGG GGACTCTCGC GCATCGATTG GACCGCAGAC
GCGGAGAATG CCAGGCTTCT CGCCTTCTAT GAAGAGCTCG GCGGCGCATG CAAAACGGAC
AAGCTCTTCT TCCGGCTCGA CGGCGAGGCG CTTGTGCAGC TTGCGAACTG A
|
|---|
| Protein sequence | MLPIRLLQPD DPALPALAIL MEEMQAHYRV ACPPRSEIIA GLKAMPRGAE ILVAEEQHRI
LGFAGFSGIY PGPGLKPGLF LKELYVAGSQ RGRGLGRALM QKLASVATQR GLSRIDWTAD
AENARLLAFY EELGGACKTD KLFFRLDGEA LVQLAN
|
|---|
| |