Gene Smed_4956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4956 
Symbol 
ID5318167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp1468388 
End bp1469596 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content63% 
IMG OID640776738 
Productputative glucosyltransferase protein 
Protein accessionYP_001313670 
Protein GI150377074 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0869476 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCAGA TACTCTATCT GGCACAGGAT CTTGCCGATC CCGCAGTGCG CCGGAGAACC 
CTCACGCTCG TCACGGGCGG CGCACGCGTG ACGCTCGCCG GCTTTCGCCG CGGCGCCAAT
CCGCTCGCAG CCATCGACGG CGTCGAGCCC ATCGAACTCG GGACCACCGC CGACGGCCGT
TTCGGCCAGC GGATCGGTGC CGTCGTCCGC GCTTGCATGT CTCTGAAAAG CAGGCTCGCA
CACGTTCCCA AGCCCGACTT GATCATCGCG CGCAACCTGG AGATGCTTGC ACTAGCCAGG
AGGGCCGTCG CCGTTTTCGG CGGCACGGTT CCGATCGTTT ACGAATGCCT GGACATTCAT
CGCCTAATGC TCCGCCAGGA CATGGTCGGG CGCACTTTGC GAGCGGCCGA AGGCCAGCTC
GGCAAGGACG TTCGCTTGCT GATCACCAGC TCCCCGGCCT TCGTCGAGCA CTATTTTCGC
CCCATTTCCA GCATCGGCGC TCCGCCGATG CTGCTCGAAA ACAAGGTTCT TGAACTCGAT
GGCATCTCCG AACCTAAAGC CGCACCGGCG GTATGCCCAG CGCCCGGTGC GCCTTGGAAG
ATCGGCTGGT TCGGGGCGTT GCGCTGCCGG AGGTCACTCG CACTTCTGGC CGAGTTCTCG
CGCAGGATGA ACGGCCGCTT CGAGGTCGTT CTGCGCGGCC GGCCAGCCTA CTCCGAGTTC
GAGGATTTCG ACGGCTTCGT TACGAACGAG CCCTTCATGC GTTTCGCAGG CGCCTATCGC
AACCCAGAAG ACCTCGCAGA TATCTATGGC GAGGTCCATT TCACCTGGGC GATCGACTTC
TTCGAGGAAG GCCAGAATTC TGCCTGGCTG CTGCCGAACC GTCTCTATGA AGGCTGCCGC
CACGGCCGAG TTCCCATCTC GATGAAAGGG ACGGAGACTG CTCGTTTCCT ATCCGTGCGG
GGCATCGGTC TCGTTCTTGA AGAAGCCGAC GCCGACAGCC TCGACACAGT CCTCGGCTCA
CTGTCTCCGC AGAGCTATGC CGACGCCGCA GAACGCATCA GCCGCTGCAA TCCCGGATCC
TGGATATTCA GCCGCGCCGA TTGCGAAGCC CTGGTGCGGC AACTGGCGGC GCTTACCGTG
GAGACGCGGC AGCACGTTCC CATAGTCGCG ACGGCGGGGG CCCGCCACAA TGAAGGTGGT
TTCTTATGA
 
Protein sequence
MLQILYLAQD LADPAVRRRT LTLVTGGARV TLAGFRRGAN PLAAIDGVEP IELGTTADGR 
FGQRIGAVVR ACMSLKSRLA HVPKPDLIIA RNLEMLALAR RAVAVFGGTV PIVYECLDIH
RLMLRQDMVG RTLRAAEGQL GKDVRLLITS SPAFVEHYFR PISSIGAPPM LLENKVLELD
GISEPKAAPA VCPAPGAPWK IGWFGALRCR RSLALLAEFS RRMNGRFEVV LRGRPAYSEF
EDFDGFVTNE PFMRFAGAYR NPEDLADIYG EVHFTWAIDF FEEGQNSAWL LPNRLYEGCR
HGRVPISMKG TETARFLSVR GIGLVLEEAD ADSLDTVLGS LSPQSYADAA ERISRCNPGS
WIFSRADCEA LVRQLAALTV ETRQHVPIVA TAGARHNEGG FL