| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4908 |
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| Symbol | |
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| ID | 5317885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 1417869 |
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| End bp | 1418831 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640776692 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_001313624 |
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| Protein GI | 150377028 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.852955 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCA TGAAGGCACT TGCGAGTGCA ACGATCCTTG CTGCCTGCAC TTTCGGCAGC
GCTTCGGCCG CGGATCTCGT CGTCGGCTTT TCTCAGATCG GATCGGAGTC CGGCTGGCGC
GCAGCCGAGA CGACGCTGAC GAAACAGCAG GCAGAAGAGC GCGGCATCGA CCTCAAATTT
GCCGATGCGC AGCAGAAACA GGAAAACCAG ATCAAGGCAA TCCGTTCCTT TATCGCCCAG
GGCGTGAACG CGATTCTTCT GGCCCCGGTC GTGGCGACCG GCTGGGATGA AGTGCTGGAA
GAGGCGAAGG ATGCGGAAAT CCCGGTCATA CTGCTCGACC GAACCGTCGA CGCTTCAAAG
GATCTTTATC TGACTGCAGT CACGTCCGAT CTCGTTCACG AAGGCAGCGT GGCCGGCAAA
TGGCTTGTCG ACACCGTTGC GGGCAAGCCG TGCAACGTCG TCGAACTCCA GGGCACCACC
GGCTCCTCGC CGGCCATCGA CCGCAAGAAG GGCTTTGAGC AGGCGCTCTC CGGCAACGAC
AATCTGAAGA TCGTGCGTAG CCAGACAGGC GATTTCACCC GCACGAAGGG CAAGGAAGTG
ATGGAAAGCT TCCTCAAGGC CGAGGACGGC GGCAAGAACA TCTGTGCGCT CTACGCCCAT
AACGACGATA TGGCGGTGGG CGCGATCCAG GCGATCAAGG AAGCCGGCCT GAAGCCCGGC
AAGGACATCC TCGTCGTCTC AATCGACGCT GTGCCCGACA TCTTCCAGGC TATGGCCGCC
GGAGAAGCAA ATGCGACGGT CGAGCTCACG CCAAACATGG CAGGCCCTGC CTTCGATGCA
CTTGCAGCCT ACCTCAAGGA CGGCAAAGAG CCTCCGAAGT GGATCCAGAC GGAATCGAAG
CTCTACACCC AGGCCGACGA TCCGATGAAG GTCTACGAAG AAAAGAAGGG TCTCGGTTAC
TGA
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| Protein sequence | MKLMKALASA TILAACTFGS ASAADLVVGF SQIGSESGWR AAETTLTKQQ AEERGIDLKF
ADAQQKQENQ IKAIRSFIAQ GVNAILLAPV VATGWDEVLE EAKDAEIPVI LLDRTVDASK
DLYLTAVTSD LVHEGSVAGK WLVDTVAGKP CNVVELQGTT GSSPAIDRKK GFEQALSGND
NLKIVRSQTG DFTRTKGKEV MESFLKAEDG GKNICALYAH NDDMAVGAIQ AIKEAGLKPG
KDILVVSIDA VPDIFQAMAA GEANATVELT PNMAGPAFDA LAAYLKDGKE PPKWIQTESK
LYTQADDPMK VYEEKKGLGY
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