| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4863 |
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| Symbol | |
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| ID | 5318848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 1363416 |
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| End bp | 1364816 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640776648 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_001313580 |
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| Protein GI | 150376984 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.321547 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACACC AGCTGGCCAG ACCGATCGCA TCGCGCAAGC CCTTCGACCC GACCTATGAT
CCGATCCGCG CGCCCAATCC GGGCGAGGGC AAGGACTATG CGCCGACCTA TTGGATTGGC
ACGGCCGGCA AACCGCCTTC CGACGACGGC CCCGTCACAT GCGATATGGA CGTCGACGTC
GCTATCGTCG GCTCCGGATA TACGGGGCTC TCCTGCGCGA TCCATCTCGC CCGCGAGCAC
GGCATAAAGG CGACGGTTCT CGAGGCAAAC GGCGTTGCCT GGGGCTGCAG CACCCGCAAT
GGTGGCCAGG CGCAGATCTC CGCAGGGCGC CTCAAGCGCT CGCAATGGAT CGAGCGATGG
GGCGTCGATA TCGCCAAAAA ACTGCACGTC GAGATCAGCG AAGCCTTCGA TCTCTTCCGA
GACCTGATCC GTTCACCCGA AATCGACTGC GATGCTCAGG ACGGCGGCCA CCTCTATATC
GCACATCGCG ACAAGGTGAT GCCGGCGCTC GAAAGCGAGT CGCGGCTCCT CAACGAGGTC
TTCGGCTACC GTTCGCGCAT CGTCGGGCGA GAGGAGGTCC ACCGGGACTT CGTCCGCGAC
GAGGAGGCCA AGGGGGCTAT GTACGAACCG GACGGGATGG GGATCCACGC AGCCAAGCTC
GCCTTCGGAT ACCTCAATCT GGCGCGCAAG CTCGGTGCGC GGGTCCATAC GGCGAGCCCC
GTTCTCACCT GCGACTGGAA AAACGGCGCC TATCACCTGT CTACGCCGGG CGGCACCGTT
CGTGCACGCG CCGTCTGCAT TGCGACGGCG GGCTATACCT CGCCGGATCT CCATAGTTTG
ACGCGGCACC GGCTCATGCC GATCCTCTCC AACTCGATCG TCACCCGTCC GCTGAACGAG
GAAGAGCGCT CCGAACTGAA CTTCAAGACG CGGATACCGC TCACAGATAC ACGCACGCTG
CGGCACTATT ACAGGATAAT GCCGGACGGC CGCGTGCAGA TCGGCAGCCG CAGCGCCATA
ACCGGCCGCG ATGCGGTGAA TCCCAAACAT CTCGGTCGGC TTCTCGAAGG GCTCTACCGA
AAGTTCCCGG TCCTGAAGGG AATCACGATC GACTACTCCT GGTGGGGCTG GGTCGATGTC
AGCCACGACA TGATGCCACG CATCTTCCGG CCCGATCCGA AGCAGCCGCT GTTCTACGCG
ATGGGCTATG GCGGCAACGG CGTCATGTAT TCCGCCCAGG CGGGACGTCG AATGGCACAG
ATGGTTGCGG GCCAGGGCGG CGCCCTCGAT CTGCCGATCT TCACGTCGCC GCTGCCGAGC
CATGGACTGC TCACGCCGTT CAGACGCCTC GGCCAGTGGG GCATGTATCG CTGGTACTAT
CTCAAAGACG AGATCCTGTA A
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| Protein sequence | MEHQLARPIA SRKPFDPTYD PIRAPNPGEG KDYAPTYWIG TAGKPPSDDG PVTCDMDVDV
AIVGSGYTGL SCAIHLAREH GIKATVLEAN GVAWGCSTRN GGQAQISAGR LKRSQWIERW
GVDIAKKLHV EISEAFDLFR DLIRSPEIDC DAQDGGHLYI AHRDKVMPAL ESESRLLNEV
FGYRSRIVGR EEVHRDFVRD EEAKGAMYEP DGMGIHAAKL AFGYLNLARK LGARVHTASP
VLTCDWKNGA YHLSTPGGTV RARAVCIATA GYTSPDLHSL TRHRLMPILS NSIVTRPLNE
EERSELNFKT RIPLTDTRTL RHYYRIMPDG RVQIGSRSAI TGRDAVNPKH LGRLLEGLYR
KFPVLKGITI DYSWWGWVDV SHDMMPRIFR PDPKQPLFYA MGYGGNGVMY SAQAGRRMAQ
MVAGQGGALD LPIFTSPLPS HGLLTPFRRL GQWGMYRWYY LKDEIL
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