Gene Smed_4850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4850 
Symbol 
ID5318255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp1354735 
End bp1354986 
Gene Length252 bp 
Protein Length83 aa 
Translation table11 
GC content53% 
IMG OID640776636 
Productacyl carrier protein 
Protein accessionYP_001313568 
Protein GI150376972 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0236] Acyl carrier protein 
TIGRFAM ID[TIGR00517] acyl carrier protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.633798 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0406767 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAAAACT CCAGCGCGAA CGCTGCTAGT CGTGTAAGAG CAATAATCAT CGAGCAGTTG 
GGCGTTGACC CTGCCCATGC TGTGGACGAC GCGTCCATAG TGGATGACCT CGGCGCCGAC
TCTCTCGAAG TCGCTCAAAT CGTCATGATG ATTGAGGACG AGTTCAATAT CGAAATTTCA
GACGACGTGG CCGAGGCCGT TATCACGGTC GGAGATGCAA TTTACGTGGT CACGTCGAAA
ACCAAGAGCT AA
 
Protein sequence
MENSSANAAS RVRAIIIEQL GVDPAHAVDD ASIVDDLGAD SLEVAQIVMM IEDEFNIEIS 
DDVAEAVITV GDAIYVVTSK TKS