Gene Smed_4755 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4755 
Symbol 
ID5319154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp1275783 
End bp1276769 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content58% 
IMG OID640776553 
Productputative ribonuclease BN 
Protein accessionYP_001313485 
Protein GI150376889 
COG category[S] Function unknown 
COG ID[COG1295] Predicted membrane protein 
TIGRFAM ID[TIGR00765] YihY family protein (not ribonuclease BN) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0442658 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0270595 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCCG GTGAGACGAG CGGATCAGGA GACCAGGCCC GAAACGAAAC AAATAGGGGA 
CGAGCGGCCG ACAGCCCGGG GGAAATCCCG GCACGTGGGT TGCGCGACGT CTTTTGGCGC
GTGGTTGCCC AAGTCAGCGA GGACAGGATT TCCCTTGTAG CGGCAGGCGT CACCTTTTAT
GTCCTCCTCT CCGTATTTCC GGCGCTGGCC TCTCTCGTTT CCATTTATGG CCTCGTTTCG
GATCCCGGGA CCATCGCTGA GCAGGCGAGC TACCTCGCAG CCATACTCCC AGCACAGTCG
CTTCAGTTGA TGACGGATCA ATTGAAAGCG CTGGCATCGC AGAATACGTC GAGTTTGAGC
CTCGGCTTCA TTGGGGGATT GCTCTTCGCG CTCTGGAGCG CGCGCAATGG AGTATCGGCC
CTCTTCGAAG CGATGAATAT TGCCTATGAT GAGACGGAAA AGCGGGGCTT CATCCGCCTG
GCGCTTCTGA GCATCGGCTT TACGCTGGCC GGTTTGATCC TGACGGCTGT GCTGATCGGG
GCCATTGCCG TTCTGCCGGC ATTGCTCTCC TTTCTCGACC TTAAGCTGCA GGGCATCATC
AGCTTTGCGC GCTGGCCGGT CATGCTGTTG CTGATCGCGG CAGTCATTAC GCTGATCTAT
CGCTACGGTC CGAGCCGCGA ACCGGCCAAA CTCCGATGGC TTACCTGGGG TGCGGCACTG
AGTACGGTCT GCTGGCTCGT CGCATCCCTG GCATTTTCGT ACTACATCGA CAATTTTGCC
AACTACAATG CGACCTACGG CGCCCTCGGC GCACTGATCG GCTTCATGCT TTGGATCTGG
ATATCCACCA TGATCGTCAT TGTCGGCGCT GAACTCAATG CCGAACTGGA GCATCAGACC
GCGCGTGACT CGACGACAGG GCCGCCCAAA GCGATTGGCA AGCGGAATGC CTACGTCGCC
GATACGGTCG GCGATACCAA GGATTAG
 
Protein sequence
MSSGETSGSG DQARNETNRG RAADSPGEIP ARGLRDVFWR VVAQVSEDRI SLVAAGVTFY 
VLLSVFPALA SLVSIYGLVS DPGTIAEQAS YLAAILPAQS LQLMTDQLKA LASQNTSSLS
LGFIGGLLFA LWSARNGVSA LFEAMNIAYD ETEKRGFIRL ALLSIGFTLA GLILTAVLIG
AIAVLPALLS FLDLKLQGII SFARWPVMLL LIAAVITLIY RYGPSREPAK LRWLTWGAAL
STVCWLVASL AFSYYIDNFA NYNATYGALG ALIGFMLWIW ISTMIVIVGA ELNAELEHQT
ARDSTTGPPK AIGKRNAYVA DTVGDTKD