Gene Smed_4692 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4692 
Symbol 
ID5318831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp1210644 
End bp1211246 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content60% 
IMG OID640776490 
Productphospholipase/carboxylesterase 
Protein accessionYP_001313422 
Protein GI150376826 
COG category[R] General function prediction only 
COG ID[COG0400] Predicted esterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.524957 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGATC ACGGTTACAT GCATAAATTG AAAGCCGGCA GTCCCGGCGG ACCCATCCTT 
TTCGTTTTTC ACGGGACCGG CGGCGACGAG AACCAGTTCT TCGACTTCGG AGCACAGCTC
CTGCCGAAAG CCACGGTGGT TTCACCAAGG GGCGACGTGT CGGAGCATGG AGCCGCCCGC
TTTTTCCGGC GAACGGGCGA GGGCGTCTAC GACATGGCGG ATCTAGCACG TGCGACTGAG
AAGATGGCGG GTTTCGTGAA GGCGCTCGCA AGCGAATACG AGGCCTCGGA GATCATCGGT
CTCGGCTACT CCAACGGTGC CAACATCCTT GCGAATGTCC TTATCGAAGA GGGTCTCTTC
GATAAGGCCG TGCTCATGCA CCCGCTGATC CCTTTCCGCC CGAAGGCCAA TGCCGCGCTC
GCCGGTCGGA AAATCCTGAT CACTGCCGGA GAACGCGACC CGATCTGCCC GGCCCCGCTG
ACACAAGCGC TGGGCGATTA CCTCTCGCAG CAGAACGCGG CGGTGGAACT GAAGTGGCAT
TCGGGTGGCC ACGACATCCG CCAGAATGAG ATCGCCGCCA CTGAAGAGTT TTTGAGAGTC
TGA
 
Protein sequence
MPDHGYMHKL KAGSPGGPIL FVFHGTGGDE NQFFDFGAQL LPKATVVSPR GDVSEHGAAR 
FFRRTGEGVY DMADLARATE KMAGFVKALA SEYEASEIIG LGYSNGANIL ANVLIEEGLF
DKAVLMHPLI PFRPKANAAL AGRKILITAG ERDPICPAPL TQALGDYLSQ QNAAVELKWH
SGGHDIRQNE IAATEEFLRV