Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4585 |
Symbol | |
ID | 5319001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | + |
Start bp | 1080932 |
End bp | 1082029 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640776386 |
Product | glycosyl transferase group 1 |
Protein accession | YP_001313318 |
Protein GI | 150376722 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATCG CCTTTCACGC GCCGCTGAAA TCGCCTGATC ATCCTGTCCC TTCCGGCGAC AGGCAGATGG CGCGCATGCT GATCGAAGCG CTCCGGCTGG CCGGGCACGA TGTCGGCGTC GTCTCTCAGT TGCGCAGCTT CTTGCGTGAA ACCTCGCACT CGGCATTTTC AGCCGTGCGC GACGAATCCC AACGGGAAAT CGACCGGATT AGGCGTCTTT GGCGGTCGGA AGGTCCGCCC GACATGTGGT TTTGCTACCA CCCTTACTAT AAGGCTCCGG ATCTCATCGG TCCTTCACTC TCGACGGAGT TCTCGATTCC CTACGTGACC GCTGAGAGTT CCTATTCGTA TCGGCGCAAC ATCGGCGCCT GGAAGCTTGC ACAGGATGAG GTTGCCGCGG GTGCACGGCG GGCCGCGGTC AACGTCTGTT TCACCCAGCG CGATCGGCAC GGCCTCGATG AGGCGATACC CGGAGCGCGC ACGGCGCTGC TCGCCCCTTT CATCGATGTG TCGCCGTTTC GGGACCTGCG AAGGACGAAA CAAGGCGAGA CCCGTCTGCT TGCGGTTGCG ATGATGCGAG CCGGCGACAA GATGGATAGC TTCCGCATGC TTGCCCGCTC CCTCGCTCTC GTGGCGGACC TGCCTTGGAA GCTGACGGTC ATAGGCGACG GTCCCGCCCG CGCCGAGGTG TTGGAGACCT TCGCGGCCTT TCCCTCAGAG CGGCTGGAGT GGCTGGGCGA AAAAGCGCCG CAGGCGGTTC CCGCGCTTCT TGCCGCCGGC GATCTTTATA TTTGGCCGGG CTGCGGAGAG GCCTACGGAT TGGCCTATCT GGAGGCGCAG GCTGCAGGCC TCCCGGTCGT TGCGCAACGC ACGGCCGGTG TGCCTGAGGT CGTCAGAGAC GGCGAAACGG GATGTCTGAC GACGCCCGGC AACACCGAGG CCTTCGCCGC GGCGGTTCGG CAATTGCTGG TGGACGAAGC CTCGCGCAAG CAGATGGCCG AGCGCGCGCG GCAATTCGTT TTCGAGCAGC GCTCGCTTCC CGCCGCCGCC GCGCGTCTCT CCGGCATATT CGCCGAGTTT GTGGATTGTG CGAAATGA
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Protein sequence | MKIAFHAPLK SPDHPVPSGD RQMARMLIEA LRLAGHDVGV VSQLRSFLRE TSHSAFSAVR DESQREIDRI RRLWRSEGPP DMWFCYHPYY KAPDLIGPSL STEFSIPYVT AESSYSYRRN IGAWKLAQDE VAAGARRAAV NVCFTQRDRH GLDEAIPGAR TALLAPFIDV SPFRDLRRTK QGETRLLAVA MMRAGDKMDS FRMLARSLAL VADLPWKLTV IGDGPARAEV LETFAAFPSE RLEWLGEKAP QAVPALLAAG DLYIWPGCGE AYGLAYLEAQ AAGLPVVAQR TAGVPEVVRD GETGCLTTPG NTEAFAAAVR QLLVDEASRK QMAERARQFV FEQRSLPAAA ARLSGIFAEF VDCAK
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