Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_4529 |
Symbol | |
ID | 5317968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009620 |
Strand | - |
Start bp | 1017088 |
End bp | 1017792 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640776330 |
Product | TfuA domain-containing protein |
Protein accession | YP_001313262 |
Protein GI | 150376666 |
COG category | [S] Function unknown |
COG ID | [COG3482] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.357658 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGGTCG TTTTCGTCGG CCCGACGGTC CCCGATGCCG CACGATTGAC GGGCGACAAA CTGACGATCC GCGCGCCGGC CGGCCAAGGC GACATTCTTC GGGCAGTGCG CGACGGGGCG GCGGCCATCG GTCTCATCGA CGGCAATTTC GAATATGTCG CTCCCGTCTG GCACAAGGAA ATTCTCTTTG CCCTTTCCGA GGGCGTGGCG GTTTTCGGCT CGGCAAGCAT GGGCGCTCTG CGCGCCGCCG AGTGCGCTGC CTTCGGAATG GTCGGAATCG GCGAGATCTA TCGCCAGTAC GCCACGGGCG AACTCGAAGA CGATTCTGAC GTTGCATTGC TCCATGCCCC CGAGCAACTC GGCTATGCGC CACTGACCCT TCCGCTCGTC AATATCAGGA GCACTCTTCG CCGGCTTCTG GATGCGCAAT CCTTGTCCGT CGAGGACTGC GCGCGGATTG CTGAGGCTGC TGCCTTGATA TTCTACAAGG AGCGAACCTT TGCTGCGATC GCCGCGCGCG CCACCATCAT GGCGAACGCT GATCTCGCGA TAGGCCGGCT CCGAACGGGC TATGTGGACC AAAAACGGGC CGACGGCCTG GAACTTCTAA AGGTGCTGGC TGGGCAGCCG GATGTGCGCC AGCTCGCTGC ACGCGATTGG GAGTTCCGTT CAACGAGCCT CTGGGAGAGA GCGTTCGGCT ATTGA
|
Protein sequence | MKVVFVGPTV PDAARLTGDK LTIRAPAGQG DILRAVRDGA AAIGLIDGNF EYVAPVWHKE ILFALSEGVA VFGSASMGAL RAAECAAFGM VGIGEIYRQY ATGELEDDSD VALLHAPEQL GYAPLTLPLV NIRSTLRRLL DAQSLSVEDC ARIAEAAALI FYKERTFAAI AARATIMANA DLAIGRLRTG YVDQKRADGL ELLKVLAGQP DVRQLAARDW EFRSTSLWER AFGY
|
| |