Gene Smed_4529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4529 
Symbol 
ID5317968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp1017088 
End bp1017792 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content62% 
IMG OID640776330 
ProductTfuA domain-containing protein 
Protein accessionYP_001313262 
Protein GI150376666 
COG category[S] Function unknown 
COG ID[COG3482] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.357658 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTCG TTTTCGTCGG CCCGACGGTC CCCGATGCCG CACGATTGAC GGGCGACAAA 
CTGACGATCC GCGCGCCGGC CGGCCAAGGC GACATTCTTC GGGCAGTGCG CGACGGGGCG
GCGGCCATCG GTCTCATCGA CGGCAATTTC GAATATGTCG CTCCCGTCTG GCACAAGGAA
ATTCTCTTTG CCCTTTCCGA GGGCGTGGCG GTTTTCGGCT CGGCAAGCAT GGGCGCTCTG
CGCGCCGCCG AGTGCGCTGC CTTCGGAATG GTCGGAATCG GCGAGATCTA TCGCCAGTAC
GCCACGGGCG AACTCGAAGA CGATTCTGAC GTTGCATTGC TCCATGCCCC CGAGCAACTC
GGCTATGCGC CACTGACCCT TCCGCTCGTC AATATCAGGA GCACTCTTCG CCGGCTTCTG
GATGCGCAAT CCTTGTCCGT CGAGGACTGC GCGCGGATTG CTGAGGCTGC TGCCTTGATA
TTCTACAAGG AGCGAACCTT TGCTGCGATC GCCGCGCGCG CCACCATCAT GGCGAACGCT
GATCTCGCGA TAGGCCGGCT CCGAACGGGC TATGTGGACC AAAAACGGGC CGACGGCCTG
GAACTTCTAA AGGTGCTGGC TGGGCAGCCG GATGTGCGCC AGCTCGCTGC ACGCGATTGG
GAGTTCCGTT CAACGAGCCT CTGGGAGAGA GCGTTCGGCT ATTGA
 
Protein sequence
MKVVFVGPTV PDAARLTGDK LTIRAPAGQG DILRAVRDGA AAIGLIDGNF EYVAPVWHKE 
ILFALSEGVA VFGSASMGAL RAAECAAFGM VGIGEIYRQY ATGELEDDSD VALLHAPEQL
GYAPLTLPLV NIRSTLRRLL DAQSLSVEDC ARIAEAAALI FYKERTFAAI AARATIMANA
DLAIGRLRTG YVDQKRADGL ELLKVLAGQP DVRQLAARDW EFRSTSLWER AFGY