Gene Smed_4505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4505 
Symbol 
ID5317945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp989386 
End bp989844 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content56% 
IMG OID640776306 
Producthypothetical protein 
Protein accessionYP_001313238 
Protein GI150376642 
COG category[S] Function unknown 
COG ID[COG5649] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.471467 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGCA AGACACCCGG CAAAACCGAG AGGGCCGCAA AGAGGGATTC TTCCGACGGA 
AAGCCGGTCC TTCTTTCCGG CGGCAATCCT CAGATAGCAA AGGGCTATGG CGACGCCCCC
GTAAAGGCCT ATATCGCAGC CATGCCCGAT TGGAAAAAAG ACCTTGGACG TCGCCTCGAT
GCGCTCATCG TGGACGCCGT TCCCAACGTA TGTAAGGCCA TCAAATGGAA CTCGCCCTTT
TACGGCATGG AGAACGACGT CTGGTTCCTC AGCTTTCACT GTTTCACGAA ATACGTCAAA
GTGACTTTCT TTCGCGGCGC ATCGCTCAAT CCTGTCCCGC CCGGCAAGTC AAAATACCCG
GAAGTACGCT ACCTCGATAT CCATGAGGGT CAACTCGATG AAGGGCAATT CTCCGCCTGG
GTCAGGCAAG CAAGCCGATT GCCCGGCGAG CGGATGTGA
 
Protein sequence
MASKTPGKTE RAAKRDSSDG KPVLLSGGNP QIAKGYGDAP VKAYIAAMPD WKKDLGRRLD 
ALIVDAVPNV CKAIKWNSPF YGMENDVWFL SFHCFTKYVK VTFFRGASLN PVPPGKSKYP
EVRYLDIHEG QLDEGQFSAW VRQASRLPGE RM